PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.I00056.1.p | ||||||||
Common Name | EUGRSUZ_I00056, LOC104418027 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 282aa MW: 32193.6 Da PI: 8.2964 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 158.1 | 3.5e-49 | 8 | 132 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+GfrFhPtdeelv++yL +k+++ ++++ +i+e+d+yk++PwdLp+++ +ekewyfFs+rd+ky++g+r+nr + +g+Wkatg dk++ Eucgr.I00056.1.p 8 LPAGFRFHPTDEELVSDYLIRKCSSLPISA-PIIAEIDLYKFDPWDLPEMALYGEKEWYFFSPRDRKYPNGSRPNREAGTGFWKATGADKPIG 99 799*************************99.88***************7666789*************************************9 PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++ g+kk Lvfy ++a+kg+ktdW+mheyrl Eucgr.I00056.1.p 100 R--PKTLGIKKALVFYAAKASKGVKTDWIMHEYRL 132 8..778***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.96E-58 | 4 | 157 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 57.514 | 8 | 157 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.3E-25 | 9 | 132 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 282 aa Download sequence Send to blast |
MKKAQLELPA GFRFHPTDEE LVSDYLIRKC SSLPISAPII AEIDLYKFDP WDLPEMALYG 60 EKEWYFFSPR DRKYPNGSRP NREAGTGFWK ATGADKPIGR PKTLGIKKAL VFYAAKASKG 120 VKTDWIMHEY RLANVDRSAG KRNSRLDDWV LCRIYNKKGT IEKYFPRTET KPQIVMPTAL 180 NSNLPPQHRH SPTCTDHMYV DSSEAVPRLH TNSSCSEHVV SPALASEKEV QSEAKQDDRE 240 KALNLQFGSM DNFLDEAFRQ GQLQLDQFLA LQEMSIYLQP F* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-77 | 3 | 163 | 10 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.I00056.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010027541.1 | 0.0 | PREDICTED: NAC domain-containing protein 2 isoform X2 | ||||
Swissprot | Q39013 | 1e-109 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A059AJ85 | 0.0 | A0A059AJ85_EUCGR; Uncharacterized protein | ||||
STRING | XP_010027540.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM190 | 28 | 276 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-112 | NAC family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.I00056.1.p |
Entrez Gene | 104418027 |