PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.H05089.1.p | ||||||||
Common Name | EUGRSUZ_H05089, LOC104415985 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 289aa MW: 33270 Da PI: 7.9696 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 160.4 | 7.3e-50 | 7 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+GfrFhPtd+elv++yL +k++++ + + +i+e+d+yk++Pw+Lp ++ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ Eucgr.H05089.1.p 7 LPAGFRFHPTDDELVNHYLLPKCASQAIGV-PIIAEIDLYKFDPWQLPDMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIG 98 799************************999.88***************6666689*************************************9 PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + g+kk Lvfy g+apkg+kt+W+mheyrl Eucgr.H05089.1.p 99 R--PKPLGIKKALVFYAGKAPKGVKTNWIMHEYRL 131 8..789***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.83E-60 | 3 | 158 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 58.396 | 7 | 158 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.3E-26 | 8 | 131 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence Send to blast |
MKAELNLPAG FRFHPTDDEL VNHYLLPKCA SQAIGVPIIA EIDLYKFDPW QLPDMALYGE 60 KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPIGRP KPLGIKKALV FYAGKAPKGV 120 KTNWIMHEYR LANVDRSASK KNKNLRLDDW VLCRIYNKKG QIEKHYVSDQ KPVPFPEMED 180 KKPEPWMLNQ SACSPLSQLV QSPMTNDLLH MDTSESVPRL HTESSCSEHT LSPDFMYEKE 240 VQSSPRWNEL DKSFEFINSY FLDEPFAAQV QYQPVQVSPL QDMFMKPF* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-82 | 2 | 164 | 10 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.H05089.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010025735.1 | 0.0 | PREDICTED: NAC domain-containing protein 2 | ||||
Swissprot | Q39013 | 1e-116 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A059B8X3 | 0.0 | A0A059B8X3_EUCGR; Uncharacterized protein | ||||
STRING | XP_010025735.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM190 | 28 | 276 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-118 | NAC family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.H05089.1.p |
Entrez Gene | 104415985 |