PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G03217.1.p
Common NameEUGRSUZ_G03217, LOC104454529
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 332aa    MW: 37018.6 Da    PI: 9.3498
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G03217.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.95.9e-104586445
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                       k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Eucgr.G03217.1.p 45 QKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 86
                      6889*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.3E-83889No hitNo description
SMARTSM003384.9E-842105IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4154488IPR004827Basic-leucine zipper domain
PfamPF001704.9E-74686IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.38E-74689No hitNo description
PROSITE patternPS0003604964IPR004827Basic-leucine zipper domain
PfamPF141443.0E-34128203IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MADGSPRTDI SSDDTDEKNQ RFDRGKSTAI VAYDSSDRSK DKTDQKTLRR LAQNREAARK  60
SRLRKKAYVQ QLESSRLKLT QLEQELQRAR QQGIFISSSG DQAHSSGGNG AMTFDVEYAR  120
WLEEQNRQIN ELRSAVTAHA GDGELRIIVD GIMAHYDEIF RLKSNAAKND VFHLLSGMWK  180
TPAERCFMWL GGFRPSELLK LLVNQLEPLT EQQLTGIGNL QQSSQQAEDA LSQGMEALQQ  240
SLAETLCSGS LGSAGSSGNV ANYMGQMAMA MGKLGTLDGF IRQADNLRQQ TLQQMNRLLT  300
TRQSARALLA IHDYFSRLRA LSSLWLARPR E*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G03217.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010067716.10.0PREDICTED: transcription factor TGA2
RefseqXP_010067717.10.0PREDICTED: transcription factor TGA2
RefseqXP_010067718.10.0PREDICTED: transcription factor TGA2
RefseqXP_018733082.10.0PREDICTED: transcription factor TGA2
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A059BI580.0A0A059BI58_EUCGR; Uncharacterized protein
STRINGXP_010067716.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM66728133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-169TGACG motif-binding factor 6