PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G02535.1.p
Common NameEUGRSUZ_G02535
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 552aa    MW: 59927 Da    PI: 7.6263
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G02535.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.12e-29179238159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       ++Dg++WrKYGqK  k +++prsYYrCt + +Cpvkk+v+r+ ed +v+++tYeg+Hnh+
  Eucgr.G02535.1.p 179 MEDGCHWRKYGQKIAKANPCPRSYYRCTVSpSCPVKKQVQRCVEDMSVLITTYEGNHNHP 238
                       58**************************999****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.3E-31164240IPR003657WRKY domain
SuperFamilySSF1182901.96E-26172240IPR003657WRKY domain
PROSITE profilePS5081127.749174240IPR003657WRKY domain
SMARTSM007743.8E-35179239IPR003657WRKY domain
PfamPF031061.6E-25180238IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 552 aa     Download sequence    Send to blast
ADRLESARAQ MGLVREENQR LKSMLSQIVK DYQSLQHQFF EVVQEEEKAE MEPSPNKLLL  60
PHNQENNEEA ELLSLTLGLS SSQLKTEGER RNTLTMQSES AKNGNSDMKQ ELSLGLYDGK  120
IMSRDHESSK DTKEGEISKK WPPSKVLKTA RSDDEQALEQ THLKKARVCV RVRCDASTME  180
DGCHWRKYGQ KIAKANPCPR SYYRCTVSPS CPVKKQVQRC VEDMSVLITT YEGNHNHPLP  240
VSATAMAFAT SAATSMIQSH SSTSQQQQQH PGLPSPTSSG PASATSSSGL YGLDFAGDRN  300
PKLPRLYFSN STSISTCNSH PTITLDLTSS PEFSNHDGYR SSSWFPSLPK LPSTFLSFSS  360
SPPSSSLPSH LDTTTHKSSS GIGPRVLNHG VPPQHQLYLP QLWPVTNTQA SHPQSLADKF  420
GAEATKATSS NLSSQSALVA AMTSFVGDRA TGFLGDKGKE GGFGLNLKFG DDPATPIELL  480
RPSPQADGIS CASSSYMDNP MALGSQHGPK SSIWFPHSSV ALSTSKKSAC ASMSPAETKD  540
HLIKFLANSE M*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-19166240174WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G02535.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010066946.10.0PREDICTED: probable WRKY transcription factor 36
TrEMBLA0A059BFX00.0A0A059BFX0_EUCGR; Uncharacterized protein (Fragment)
STRINGXP_010066946.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM29592868
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.14e-51WRKY DNA-binding protein 72