PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G02494.3.p
Common NameEUGRSUZ_G02494, LOC104453942
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family G2-like
Protein Properties Length: 305aa    MW: 33734.6 Da    PI: 6.1772
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G02494.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like32.12.6e-101233355
           G2-like 33 lelmkvkgLtlehvkSHLQkYRl 55
                      +++m+++gLtl+h+kSHLQkYRl
  Eucgr.G02494.3.p  1 MRAMGIPGLTLYHLKSHLQKYRL 23
                      689*******************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.4E-9125IPR009057Homeodomain-like
PfamPF143791.1E-2273119IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MRAMGIPGLT LYHLKSHLQK YRLGKSQQSE SCIDTKQEGE FYATENKEVQ SADEYQNTEI  60
IDPSTFQMNE SLQIAQALQM QMEVQRKLHE QIEVQKHLQL RIEAQGKYLQ SVLRKAQETL  120
ARYNNSPVGI DAAKAELSQL VSMVSSGCPG SPFSELTELG SSDLNDAARK QLKGICSVES  180
SLTSSESSGR NEEKPKGNEH GEMHNFSPTS IELRLSNIRP EEVPSQNICN KTTGRKRCAS  240
SGSDDNSLIA EQSSKSSPRT SYKQKKCGLP VTLDLNSQYQ ADFDPGPKSI DLNFQGIEQA  300
NGHF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G02494.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010066903.10.0PREDICTED: myb family transcription factor PHL8
SwissprotF4I2745e-53PHL8_ARATH; Myb family transcription factor PHL8
TrEMBLA0A059BFT60.0A0A059BFT6_EUCGR; Uncharacterized protein
TrEMBLA0A059BH270.0A0A059BH27_EUCGR; Uncharacterized protein
STRINGXP_010066903.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.12e-55G2-like family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]