PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.G02493.1.p | ||||||||
Common Name | EUGRSUZ_G02493, LOC104453941 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | Dof | ||||||||
Protein Properties | Length: 241aa MW: 26499.5 Da PI: 8.2665 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 119.8 | 1e-37 | 141 | 200 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +ek+l+cprC+s++tkfCyynny+l+qPr++C++C+ryWt+GG++rn+PvG+grrk+k+s Eucgr.G02493.1.p 141 PEKILPCPRCNSMDTKFCYYNNYNLNQPRHLCRKCQRYWTAGGTMRNIPVGAGRRKSKNS 200 78999****************************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-29 | 138 | 198 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 5.1E-32 | 143 | 199 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.062 | 145 | 199 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 147 | 183 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence Send to blast |
MLEMKDAAIK LFGQTIGLRE KRGVLDEPSW GGGKEFASEA GGPGSWDRGG SVSADAAWQE 60 QRGGREAGET RGDKALSERE PMNEKYEEGI SCWAVDNPKD SAESTIINQK DETGRETSPP 120 SAQNKEESET SISRETTLKK PEKILPCPRC NSMDTKFCYY NNYNLNQPRH LCRKCQRYWT 180 AGGTMRNIPV GAGRRKSKNS YAATVALFHN TGVPESLRAD CAGDLKTAGT TILRFGFRFS 240 * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.G02493.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010066902.1 | 1e-180 | PREDICTED: cyclic dof factor 2 | ||||
TrEMBL | A0A059BFI3 | 1e-178 | A0A059BFI3_EUCGR; Uncharacterized protein | ||||
STRING | XP_010066902.1 | 1e-179 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM2809 | 26 | 69 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39660.2 | 4e-41 | cycling DOF factor 2 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.G02493.1.p |
Entrez Gene | 104453941 |