PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.G02469.2.p | ||||||||
Common Name | EUGRSUZ_G02469 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | WRKY | ||||||||
Protein Properties | Length: 433aa MW: 46145.4 Da PI: 6.2387 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 109.6 | 1.4e-34 | 249 | 305 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers d++++ei+Y+g+Hnh+ Eucgr.G02469.2.p 249 DDGYNWRKYGQKQVKGSEFPRSYYKCTHPTCPVKKKVERSL-DGQITEIIYKGQHNHQ 305 8****************************************.***************8 PP | |||||||
2 | WRKY | 34.5 | 4.2e-11 | 411 | 432 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDgy+WrKYGqK vkg+++pr Eucgr.G02469.2.p 411 LDDGYRWRKYGQKLVKGNPYPR 432 59*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.4E-30 | 239 | 307 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 23.468 | 243 | 307 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.83E-26 | 246 | 307 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.0E-38 | 248 | 306 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.8E-26 | 249 | 305 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.7E-12 | 397 | 432 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.22E-9 | 403 | 432 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 16.145 | 406 | 432 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.8E-7 | 412 | 432 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 433 aa Download sequence Send to blast |
MAFANHVPLW AHALGIFPSS RELFSISQFD SGNSSGGGGG GGGGGWLGGM GLGLSPGPMT 60 MVSHLFPDGE DCKSFSQLLS GATAASPTAQ YLGFSFPSAS SAPERTAVLP PGELRFKQSR 120 PDGLAVTQPL FAIPPGLSPG ALLDSPGTFH PVPGHLGMSY QHGFLRMGTQ GLQAQPHHVQ 180 SGYASASSST AALSLGRMQF PPFAVSTSMM NQQNLSLEGP KIIESEPIDF SRPDQRPPVS 240 SFAIDKPADD GYNWRKYGQK QVKGSEFPRS YYKCTHPTCP VKKKVERSLD GQITEIIYKG 300 QHNHQPPKGN KRAKDSGAAN GSSDVEESSQ IPLGLMPQDP ESSQVTPAQF SGTSDSEEVG 360 DADTGADEGD EDEPEPKRRS MEVMAPDAGS VHRTITEPKI IVQTTSEVDL LDDGYRWRKY 420 GQKLVKGNPY PR* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 9e-18 | 248 | 309 | 14 | 76 | WRKY transcription factor 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.G02469.2.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salicylic acid and during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010066870.1 | 0.0 | PREDICTED: probable WRKY transcription factor 3 | ||||
Swissprot | Q9ZQ70 | 1e-111 | WRKY3_ARATH; Probable WRKY transcription factor 3 | ||||
TrEMBL | A0A059BGD5 | 0.0 | A0A059BGD5_EUCGR; Uncharacterized protein | ||||
STRING | XP_010066870.1 | 0.0 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03340.1 | 6e-95 | WRKY DNA-binding protein 3 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.G02469.2.p |
Publications ? help Back to Top | |||
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