PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G01758.1.p
Common NameEUGRSUZ_G01758, LOC104453408
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 491aa    MW: 55588.6 Da    PI: 6.2118
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G01758.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM115.45.8e-36111462128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk........kvkaeekewyfFskrdkky.atgkrknratksgyWka 85 
                       p+G+rFhPt ee v++yLk++v g +     +i++vdiy+++P +Lp           + + +ew+fFs+   +  ++ +r +r+t sgyWk+
  Eucgr.G01758.1.p  11 PVGYRFHPTGEEFVNHYLKRRVLGIQGGP-CIIPDVDIYQYDPGQLPDlfhdksiiGRDDQVQEWWFFSPDTPQRfQRPTRVQRSTPSGYWKK 102
                       89*********************999544.47**************95467766432223566******987655156899************ PP

               NAM  86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       tg dkev+++ + +++g+k+ Lvfy+gr +k+ kt+Wv+h yrl
  Eucgr.G01758.1.p 103 TGDDKEVKARgTATVIGIKEYLVFYQGRGKKADKTNWVIHAYRL 146
                       *********9556679**************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.62E-393162IPR003441NAC domain
PROSITE profilePS5100543.12810163IPR003441NAC domain
PfamPF023653.3E-2111146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 491 aa     Download sequence    Send to blast
MGAMINLQDF PVGYRFHPTG EEFVNHYLKR RVLGIQGGPC IIPDVDIYQY DPGQLPDLFH  60
DKSIIGRDDQ VQEWWFFSPD TPQRFQRPTR VQRSTPSGYW KKTGDDKEVK ARGTATVIGI  120
KEYLVFYQGR GKKADKTNWV IHAYRLPADD LNRTHVLCHL KHERDEKADN STVVSERGAI  180
NLTDFELDLH RPVDEDLFPE PLIQAQMISL MELIPPGNRI EFAAGFLQQL HPELGLQNNS  240
FPSNLHEPAN IEGPSVMDIP RDDGLTDESI QSMFGTSEED EDIGDMQSAD LAYADFLEGS  300
METEYDQTFY SHHEHPVQMN RRAQTTDSVH GFVSLEEKKG MVEKKFNGST VTSEKPKLHP  360
VPGVPHRPVA PPIRPASEKC YSKNEELKFR KVKQETAAKN VKPELLSLDE TAARAKVRKY  420
KERSPDRNST KKTNSKENEY AREKSNLVAA STVTTSEGTK SSTNSPLSYL VNVLVAIFML  480
LTITRLVLNF *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-27914614140Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G01758.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010066255.10.0PREDICTED: NAC domain-containing protein 14
TrEMBLA0A059BDZ20.0A0A059BDZ2_EUCGR; Uncharacterized protein
STRINGXP_010066255.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM3422822
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.31e-37NAC transcription factor-like 9