PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G01703.1.p
Common NameEUGRSUZ_G01703, LOC104453357
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family TALE
Protein Properties Length: 661aa    MW: 71764.4 Da    PI: 5.9326
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G01703.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.42.9e-094054421954
                       HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
          Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                       Fe   ++yp+ +++  LA+++gLt +qV++WF N R +
  Eucgr.G01703.1.p 405 FEHflHPYPKDSDKIMLARQTGLTRSQVSNWFINARVR 442
                       664559******************************88 PP
2BELL122.41.9e-39270341172
              BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                       e+q+lq+k +kLls+l+eVdkrYkqy++q+q+v+ sF+++ag g+akpYt+lAl++iSrhFrcL dai++qi
  Eucgr.G01703.1.p 270 EKQDLQNKLTKLLSMLDEVDKRYKQYYHQMQIVVQSFDTIAGSGAAKPYTALALQRISRHFRCLHDAITGQI 341
                       6899*******************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005745.2E-59194339IPR006563POX domain
PfamPF075264.2E-50199338IPR006563POX domain
PROSITE profilePS5007112.212383446IPR001356Homeobox domain
CDDcd000864.08E-13386447No hitNo description
SMARTSM003891.0E-9386450IPR001356Homeobox domain
SuperFamilySSF466892.61E-17387453IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.2E-29389452IPR009057Homeodomain-like
PfamPF059204.4E-18403442IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 661 aa     Download sequence    Send to blast
MATYYTNSNQ RDAAPALYLR ESMHSSFPET PVLSGNMMLY MNPGPYADNP LGGNSQQQSN  60
GMEVPSVGGI DSVQQQQQQQ QQEILSNFGG SRSGDQDFSL WRDGRNEMLL MPPLQSPHGQ  120
GLSLSLGTQI PSGIHMPSAN LSSISFLGPI PMVSGDGGGR TGSERSRNAD CAPAGFPGGD  180
EDVNKGGDIP YGMSTIVRVI PNSRYLRVAQ QLLDEIVNVR KALKRPDDAN DQSRHENQRS  240
PKDADGGSKN EASSNPQESA SNSSELSAAE KQDLQNKLTK LLSMLDEVDK RYKQYYHQMQ  300
IVVQSFDTIA GSGAAKPYTA LALQRISRHF RCLHDAITGQ IQATRKSLGE QDTSNSNGIS  360
RLRYVDQHLR QQRSMQHLGI MQQHAWRPQR GLPENSVSIL RAWLFEHFLH PYPKDSDKIM  420
LARQTGLTRS QVSNWFINAR VRLWKPMVEE MYKEEIGDPE MDSNSSSETA AKATGGDGRS  480
SEDKGEDLQQ SASSTATKRC GTGNFMDLKP PVVNPEMEIS GPTFNSGTHG EVDAEYGFKL  540
RGGHIPGGND GILFSDSIVQ SDGGNNRFMA AATAAYNVSN FGQFGGGTGV SLTLGLQHCD  600
GGTLPLSNSM DHGIASMRGD GFYNAAASSV GAETMEFEGS SPGEQQHRLA SNQLFHDFVA  660
*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A2e-16392449158Homeobox protein Meis1
4xrs_B2e-16392449158Homeobox protein Meis1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G01703.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010066189.10.0PREDICTED: BEL1-like homeodomain protein 6
RefseqXP_010066190.10.0PREDICTED: BEL1-like homeodomain protein 6
TrEMBLA0A059BEC80.0A0A059BEC8_EUCGR; Uncharacterized protein
STRINGXP_010066189.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM28692563
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34610.21e-129BEL1-like homeodomain 6