PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.G01551.1.p | ||||||||
Common Name | EUGRSUZ_G01060, LOC104452963 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 142aa MW: 16691.2 Da PI: 8.6255 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 121.3 | 8.7e-38 | 10 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk........kvkaeekewyfFskrdkkyatgkrknratksgyWka 85 lp G+rFhPtdee v++yL+++v g + +i++vdi++++Pw+Lp+ + + + +ew+ ++ + ++ +r+t sgyWk+ Eucgr.G01551.1.p 10 LPIGYRFHPTDEEFVDHYLTNRVLGIVEDP-CIIPDVDICRWDPWELPQkfhgesiiRPDDKVQEWWCYCLQTP-----QQVKRTTPSGYWKK 96 699*********************998666.57***************6466655443333667******9866.....5789********** PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 tg d++v++ ++ ++g+kktLvf+ + +kg+kt+Wv+hey+l Eucgr.G01551.1.p 97 TGPDRNVKA-RDIKIGTKKTLVFHIRQGSKGVKTNWVIHEYHL 138 ********9.9999***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.84E-40 | 5 | 140 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 36.629 | 10 | 142 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.8E-23 | 11 | 138 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence Send to blast |
MGAVIIPQNL PIGYRFHPTD EEFVDHYLTN RVLGIVEDPC IIPDVDICRW DPWELPQKFH 60 GESIIRPDDK VQEWWCYCLQ TPQQVKRTTP SGYWKKTGPD RNVKARDIKI GTKKTLVFHI 120 RQGSKGVKTN WVIHEYHLLI KN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-27 | 9 | 138 | 14 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.G01551.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010066085.1 | 1e-106 | PREDICTED: NAC domain-containing protein 37 | ||||
TrEMBL | A0A059BC53 | 1e-102 | A0A059BC53_EUCGR; Uncharacterized protein | ||||
STRING | XP_010066085.1 | 1e-105 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM35283 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.3 | 4e-40 | NAC transcription factor-like 9 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.G01551.1.p |
Entrez Gene | 104452963 |