PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.G01548.2.p | ||||||||
Common Name | EUGRSUZ_G01548, LOC104453257 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 798aa MW: 90121.3 Da PI: 6.4875 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 110.8 | 1.5e-34 | 11 | 139 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvka......eekewyfFskrdkkyatgkrknratksgyWk 84 p+G+ F+Ptdeelv++yLk kv+g + +i+evdi+k+ePw+Lp+ + + + +ew+fF + r +r+t g+Wk Eucgr.G01548.2.p 11 PVGYGFRPTDEELVDYYLKLKVQGFTGVN-CIIPEVDICKWEPWELPNifeeQ--SiippddKAQEWWFFYLQTP------RIQRSTPLGFWK 94 79**********************99433.57***************645550..14555445669988888655......7899******** PP NAM 85 atgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +tg d+++++ +++++g+kktLvfykg+ ++g t+Wv+hey+l Eucgr.G01548.2.p 95 KTGVDRTIKTGdRNRAIGTKKTLVFYKGHGKRGIGTKWVIHEYHL 139 ********99867788***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 8.76E-39 | 8 | 164 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 41.094 | 10 | 164 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.8E-20 | 11 | 139 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 798 aa Download sequence Send to blast |
MEPVIIPRNP PVGYGFRPTD EELVDYYLKL KVQGFTGVNC IIPEVDICKW EPWELPNIFE 60 EQSIIPPDDK AQEWWFFYLQ TPRIQRSTPL GFWKKTGVDR TIKTGDRNRA IGTKKTLVFY 120 KGHGKRGIGT KWVIHEYHLL TNNLNELFPH APTKSYVVCH LKHKGNEESD FSALQLNGGG 180 ISLMDLDSGL HQPEQNNSFP EPWSEAVGNS SISLADLDSN LHQPEHENLF LEPWIQAVEN 240 PSISLVDLQS DLRQPEPENS CPESWILVDS ATEPSLQQDN QVQVITSILP QTSFQSEIDS 300 QTDLHVRNFG SPSFANLPWD DESNQLQVGY IDRDQIQTQY GPKCSPDDEH AVLRKSQRAK 360 MIKSLHGVVS LDEKKGFIEH KFNGLHISSQ KHMEPPKKPE IARTYSTDEE SRVEKVEKLE 420 LAARNIKPEC VTLDELEAKA KYGQTSSSRN AHAKVENWQT PTIETLHGQT SSSQNKNAME 480 ETGQTLAIEL PHGCREVPPE EKKSFDRNES NCSNVFPPKR MDPLEEPATV RIYSKGEKMR 540 FLEVKKQELA AKNIKPNCAL LDDSATKAKS HNEHVAVVDN VRIGTVEPLN GVAPLHKKKG 600 FDKNKFDSLH VSSTKHTELL EKLRKEDLAA RNSKSVYIPL DESIAIAKHD QASRFHKGSI 660 LEENWLTSTN KSLDGVLKGK KGCTESELDE WEIVSAKQTE HPKKAGNAGI SCKYKDPRLE 720 KLKMPEFSAR EISNQKVHLW LNQKLDQRGE SNEHREETEP AREISISATP SAGSTSNHAK 780 ISANSSTFKI TTRFMPW* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-24 | 9 | 167 | 14 | 171 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.G01548.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010066081.1 | 0.0 | PREDICTED: protein NTM1-like 9 isoform X2 | ||||
TrEMBL | A0A059BCW1 | 0.0 | A0A059BCW1_EUCGR; Uncharacterized protein | ||||
STRING | XP_010066080.1 | 0.0 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.1 | 3e-39 | NAC 014 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.G01548.2.p |
Entrez Gene | 104453257 |