PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G01507.1.p
Common NameEUGRSUZ_G01507
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 196aa    MW: 22355.2 Da    PI: 8.0699
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G01507.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM93.24.2e-2961283128
               NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                       +G+ F+Pt+e+lv ++Lkkk++g+  e+ ++i+ev iy++eP dL        + +++ +e++fF++r +k        r+t+ g+Wk+t k+
  Eucgr.G01507.1.p   6 VGYGFKPTEEQLVGHFLKKKLKGEL-EA-SAIPEVYIYDWEPADLFLlydgfsSESSDGRECFFFCPRGRK--------RKTQLGFWKETSKK 88 
                       79*******************9987.44.58**************634666643334677*******9885........67899********* PP

               NAM  90 kevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + + +  +++ +g+k+++v+y+gr+p+g++td  mhey+l
  Eucgr.G01507.1.p  89 RVIRAPdTSKPMGTKRIFVYYEGRQPRGRRTDVAMHEYHL 128
                       *9999877788****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100532.294172IPR003441NAC domain
SuperFamilySSF1019414.18E-315170IPR003441NAC domain
PfamPF023658.5E-196128IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MEERQVGYGF KPTEEQLVGH FLKKKLKGEL EASAIPEVYI YDWEPADLFL LYDGFSSESS  60
DGRECFFFCP RGRKRKTQLG FWKETSKKRV IRAPDTSKPM GTKRIFVYYE GRQPRGRRTD  120
VAMHEYHLNT DDSDSEILDP VLDFSSFGSP NLASLTWLQV QTAMVLCHII NRKSKEAKSA  180
TASASTDLSS HLNSAQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-15712818140Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G01507.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018732412.11e-144PREDICTED: protein NTM1-like 9 isoform X1
TrEMBLA0A059BCQ71e-145A0A059BCQ7_EUCGR; Uncharacterized protein (Fragment)
STRINGXP_010066062.11e-122(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.14e-30NAC 014