PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.G01078.1.p | ||||||||
Common Name | EUGRSUZ_G01078 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 250aa MW: 27801 Da PI: 7.3269 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 67.5 | 3.7e-21 | 32 | 114 | 48 | 128 |
NAM 48 p.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 p +++ ++ +e++fF++rd+k +++ r++r+t+ g+Wk t k++ v + +ge++g k++Lv+y+gr+ ++++t+ mhey+l Eucgr.G01078.1.p 32 PlSRIPSDGHECFFFCPRDNKIPNSLRSSRKTEFGFWKDTSKKRGVQAPgTGEEIGFKRILVYYEGRQGDARRTHFSMHEYHL 114 5446677889*************************************9988899****************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 24.08 | 1 | 137 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.9E-11 | 20 | 114 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 6.67E-25 | 37 | 136 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence Send to blast |
MAKGTQIQAD GERIRRPSLA KKAERRKGNY LPLSRIPSDG HECFFFCPRD NKIPNSLRSS 60 RKTEFGFWKD TSKKRGVQAP GTGEEIGFKR ILVYYEGRQG DARRTHFSMH EYHLKSNVSN 120 SEIPNPREFV LCHITNRKCE KAGSESAITS TGANLTIPST LSNSECEGAH DFSLQASPAV 180 TVESESSNHT MLNHGLPDHS AYVPQQPDML GMESSLHNDN WFVDGASDKH FALSCPPSDD 240 VIFLSDLWS* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.G01078.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018732477.1 | 1e-162 | PREDICTED: protein NTM1-like 9 | ||||
TrEMBL | A0A059BC67 | 0.0 | A0A059BC67_EUCGR; Uncharacterized protein | ||||
STRING | XP_010065781.1 | 1e-162 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 5e-21 | NAC transcription factor-like 9 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.G01078.1.p |