PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.G01075.1.p | ||||||||
Common Name | EUGRSUZ_G01075, LOC104452969 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 254aa MW: 28836.6 Da PI: 5.7941 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 83.8 | 3.5e-26 | 9 | 133 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 p+G+rF+Pt++elv ++L+kk++g+ ++ vi+e++iy++eP +L + ++ ++ +e++fF++r +k r+t g+Wk+t + Eucgr.G01075.1.p 9 PVGLRFKPTEDELVGHHLTKKLRGEMETI-CVIPELHIYNWEPPELFArynelsSIPSDGSECFFFCPRGRK--------RKTPCGFWKETST 92 89**********************99777.78**************743555555555888*******9885........77999******** PP NAM 89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +++ + e++gl+++Lv+++gr++++++t+ mh y+l Eucgr.G01075.1.p 93 KRVIKAPdSAEEMGLRRSLVYHEGRQRNAHRTNLGMHIYNL 133 999999867778*************************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.15E-31 | 5 | 155 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 30.867 | 8 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.0E-17 | 9 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence Send to blast |
MAESMEAWPV GLRFKPTEDE LVGHHLTKKL RGEMETICVI PELHIYNWEP PELFARYNEL 60 SSIPSDGSEC FFFCPRGRKR KTPCGFWKET STKRVIKAPD SAEEMGLRRS LVYHEGRQRN 120 AHRTNLGMHI YNLNSNVSDS EILDPTALVL CHIKNRKKEK AKPETPSTST ELSGPSNLND 180 SQIEETQDMS EQTSPEVTVD LPPNEMSNFN LPDRNLPTPD QQPHTTEEQH CLMIIMSTMT 240 NLAMDIVSCH ISK* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 7e-16 | 9 | 162 | 16 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.G01075.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010065770.1 | 0.0 | PREDICTED: NAC domain-containing protein 14 | ||||
TrEMBL | A0A059BC63 | 0.0 | A0A059BC63_EUCGR; Uncharacterized protein | ||||
STRING | XP_010065770.1 | 0.0 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.2 | 3e-30 | NAC 014 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.G01075.1.p |
Entrez Gene | 104452969 |