PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.G01074.1.p | ||||||||
Common Name | EUGRSUZ_G01074, LOC104452970 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 277aa MW: 31350.8 Da PI: 5.879 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 95.7 | 7.1e-30 | 9 | 134 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka......eekewyfFskrdkkyatgkrknratksgyWkatgk 88 p+G+rF+Pt+++lv +yL+kk++gk++ + i+e+diy++eP++L +++++ + +e++fF++r + +++r+t+ g+Wk+t Eucgr.G01074.1.p 9 PVGVRFKPTEDQLVGHYLTKKLKGKETVC--EIPELDIYNLEPSELFARYNElsslplDGNECFFFCPRGH------KRKRKTQCGFWKETCA 93 89************************777..59*************753333344565889*******966......5678899********* PP NAM 89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ + + ++e++gl+++Lv++kgr++++++t+ m ey+l Eucgr.G01074.1.p 94 KRVIQAPdTSEQIGLRRSLVYHKGRQRDAHRTNSHMYEYHL 134 999999878899****************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.57E-33 | 6 | 157 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 32.74 | 8 | 157 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.9E-19 | 9 | 134 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence Send to blast |
MAESARAWPV GVRFKPTEDQ LVGHYLTKKL KGKETVCEIP ELDIYNLEPS ELFARYNELS 60 SLPLDGNECF FFCPRGHKRK RKTQCGFWKE TCAKRVIQAP DTSEQIGLRR SLVYHKGRQR 120 DAHRTNSHMY EYHLKSNVSD SEISDPAAWV LCQIINKKSK KAKSGTASTS TDLSRPSNLN 180 DSQKEETQDI SAQASPGVTV EFPFPNEMSN SNLPIPDQQP QMSEEQYLSH DDCQHDDKPS 240 DGFWCKSYSP SDGIDLADLF KESTDQYSKL EDNTSV* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 5e-17 | 2 | 163 | 9 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.G01074.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010065772.1 | 0.0 | PREDICTED: protein NTM1-like 9 | ||||
TrEMBL | A0A059BCR3 | 0.0 | A0A059BCR3_EUCGR; Uncharacterized protein | ||||
STRING | XP_010065772.1 | 0.0 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 6e-27 | NAC transcription factor-like 9 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.G01074.1.p |
Entrez Gene | 104452970 |