PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.G01067.5.p | ||||||||
Common Name | EUGRSUZ_G01067 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 676aa MW: 76536.4 Da PI: 6.8997 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 107.8 | 1.3e-33 | 10 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvka......eekewyfFskrdkkyatgkrknratksgy 82 lp+G+ F+Ptdeelv++yLk kv+g + ++ +i+evdi+k+ePw+Lp+ + + + +ew+fF + + +r+t g+ Eucgr.G01067.5.p 10 LPVGYGFRPTDEELVDYYLKLKVQGFTgVD--CIIPEVDICKWEPWELPRifeeQ--SiippddKVQEWWFFYLQTS------PIQRSTPLGF 92 799**********************99333..47***************645540..14555445669999888765......457999**** PP NAM 83 Wkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 Wk+tg d+++++ +++++g+kktLvf++g+ ++g t+Wv+hey+l Eucgr.G01067.5.p 93 WKKTGVDRTIKAGdSNREIGTKKTLVFHRGHGKRGIGTKWVIHEYHL 139 ***********9866778***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.4E-36 | 6 | 145 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 36.917 | 10 | 168 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.0E-19 | 11 | 139 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 676 aa Download sequence Send to blast |
MGAVIIPRNL PVGYGFRPTD EELVDYYLKL KVQGFTGVDC IIPEVDICKW EPWELPRIFE 60 EQSIIPPDDK VQEWWFFYLQ TSPIQRSTPL GFWKKTGVDR TIKAGDSNRE IGTKKTLVFH 120 RGHGKRGIGT KWVIHEYHLL TNNLNELFPH VHKGNEESDF SALQLNGGGI SLMDLDSGLH 180 QPEQNNSFPE SWILVDSATE PSLQRDNQVQ VITSILPQTS FQSEIDSQTD LHVRNFGSPS 240 FANLPWDDES NQLQVGYIDR DQIQTQYGPK CSPDDEHAVL RKSQRAKMIK SLHGVVSLDE 300 KKGFIEHKFN GLHISSPKHM EPPKKPEIAR TYSTDEESRV EKVEKLELAA RNIKPECVTL 360 DELEAKAKYG QTSSSRNAHA KVENWQTPTI ETLHGQTSSS QNKNAMEETG QTLAIELPHG 420 CREVPPEEKK SFDRNESNCS NVFPPKRMDP LEEPATVRIY SKGEKMRFLE VKKQELAAKN 480 IKPNCALLDD SATKAKLHNE HVALVDNVRI GTVEPLNGVA PLHKKKGFDK NKFDSLHVSS 540 TKHTELLEKL RKEDLATRNS KSVYIPLDES IAIAKHDQAS RFHKGSTLEE NWLTSTNKSL 600 DGVLKGKKGC TESELDEWEI VSAKQTEHPK KAGNAGISCK YKDPRLEKLK MPEFSATEIS 660 NQKVHLWLNQ KLDQR* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-22 | 9 | 139 | 14 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.G01067.5.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010066081.1 | 0.0 | PREDICTED: protein NTM1-like 9 isoform X2 | ||||
TrEMBL | A0A059BB60 | 0.0 | A0A059BB60_EUCGR; Uncharacterized protein | ||||
STRING | XP_010066080.1 | 0.0 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.1 | 5e-35 | NAC 014 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.G01067.5.p |