PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G01067.3.p
Common NameEUGRSUZ_G01067
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 725aa    MW: 81865.2 Da    PI: 6.9433
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G01067.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM107.71.4e-33101391128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvka......eekewyfFskrdkkyatgkrknratksgy 82 
                       lp+G+ F+Ptdeelv++yLk kv+g + ++   +i+evdi+k+ePw+Lp+    +  +      + +ew+fF  + +        +r+t  g+
  Eucgr.G01067.3.p  10 LPVGYGFRPTDEELVDYYLKLKVQGFTgVD--CIIPEVDICKWEPWELPRifeeQ--SiippddKVQEWWFFYLQTS------PIQRSTPLGF 92 
                       799**********************99333..47***************645540..14555445669999888765......457999**** PP

               NAM  83 Wkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       Wk+tg d+++++  +++++g+kktLvf++g+ ++g  t+Wv+hey+l
  Eucgr.G01067.3.p  93 WKKTGVDRTIKAGdSNREIGTKKTLVFHRGHGKRGIGTKWVIHEYHL 139
                       ***********9866778***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.79E-366145IPR003441NAC domain
PROSITE profilePS5100536.91710168IPR003441NAC domain
PfamPF023651.1E-1911139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 725 aa     Download sequence    Send to blast
MGAVIIPRNL PVGYGFRPTD EELVDYYLKL KVQGFTGVDC IIPEVDICKW EPWELPRIFE  60
EQSIIPPDDK VQEWWFFYLQ TSPIQRSTPL GFWKKTGVDR TIKAGDSNRE IGTKKTLVFH  120
RGHGKRGIGT KWVIHEYHLL TNNLNELFPH VHKGNEESDF SALQLNGGGI SLMDLDSGLH  180
QPEQNNSFPE SWILVDSATE PSLQRDNQVQ VITSILPQTS FQSEIDSQTD LHVRNFGSPS  240
FANLPWDDES NQLQVGYIDR DQIQTQYGPK CSPDDEHAVL RKSQRAKMIK SLHGVVSLDE  300
KKGFIEHKFN GLHISSPKHM EPPKKPEIAR TYSTDEESRV EKVEKLELAA RNIKPECVTL  360
DELEAKAKYG QTSSSRNAHA KVENWQTPTI ETLHGQTSSS QNKNAMEETG QTLAIELPHG  420
CREVPPEEKK SFDRNESNCS NVFPPKRMDP LEEPATVRIY SKGEKMRFLE VKKQELAAKN  480
IKPNCALLDD SATKAKLHNE HVALVDNVRI GTVEPLNGVA PLHKKKGFDK NKFDSLHVSS  540
TKHTELLEKL RKEDLATRNS KSVYIPLDES IAIAKHDQAS RFHKGSTLEE NWLTSTNKSL  600
DGVLKGKKGC TESELDEWEI VSAKQTEHPK KAGNAGISCK YKDPRLEKLK MPEFSATEIS  660
NQKVHLWLNQ KLDQRGESNE HREETEPARE ISISATPSAG STSNHAKISA NSSAFKITKR  720
FMPW*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-22913914140Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G01067.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010066081.10.0PREDICTED: protein NTM1-like 9 isoform X2
TrEMBLA0A059BB600.0A0A059BB60_EUCGR; Uncharacterized protein
STRINGXP_010066080.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.15e-35NAC 014