PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.G01052.1.p | ||||||||
Common Name | EUGRSUZ_G01052, LOC104452959 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 529aa MW: 60570.1 Da PI: 6.4086 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 79 | 1e-24 | 24 | 147 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgy.Wkatg 87 +G+ F+Pt+eel+ +yLk v g + ++ +i+++ ++y+++PwdLp+ v ++++ew+f ++++++ +r++r+t g+ W+ tg Eucgr.G01052.1.p 24 AGYGFRPTEEELI-NYLKSAVPGWRESF-CIIPTLeNVYRIDPWDLPAkfnensIVPSSDQEWWFICPQAQN----QRNSRKTPCGFsWNITG 110 799**********.9**********888.66887779**********63555544444899*******8775....689999999988***** PP NAM 88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 k +++++k + ++g k++Lvf +g+ t+Wv+hey+l Eucgr.G01052.1.p 111 KPRDITAKnDVDKIGYKRMLVFQ-----DGVPTNWVIHEYHL 147 ******9855667*********8.....7899********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.32E-27 | 21 | 163 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 28.599 | 22 | 164 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.4E-14 | 24 | 147 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 529 aa Download sequence Send to blast |
METRIHPMNF EVKEIALLLQ QKVAGYGFRP TEEELINYLK SAVPGWRESF CIIPTLENVY 60 RIDPWDLPAK FNENSIVPSS DQEWWFICPQ AQNQRNSRKT PCGFSWNITG KPRDITAKND 120 VDKIGYKRML VFQDGVPTNW VIHEYHLPDH HFNSNYVLCH LKRRRNEEAD NLAYLESYLH 180 QPDHEDSFAE YLIQETMNSL IENESPPVMD FTLDNGLYDE YIQLASETSE EDEDVDYMLN 240 RDFVDVGFFD GDAMETQSLQ HGQGSNLHNE SPALMRNRRT RTIDSLHGVV PLEEKKGMVE 300 NKFNGSLIAP EKPTAPPVHA ASAKYRGKDE VPQFEKAKQE TGAKRIKPEY TYWDEREARA 360 KNGQISIMEN RQTRTNGSVY GAVPLEQKKG VIQSKFNRSH VSSAKPTELP EKPKTPKISE 420 PSRFYINEGM RREGVKKQEI ALSNIKTECV SWDEAVATAK VLKYREHCSS SNSPRKKTSR 480 ETEQAREKAN SVTARTRPTT TNPPQPNPLN VIVGIILLFA LIYDFVIA* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.G01052.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010065761.1 | 0.0 | PREDICTED: uncharacterized protein LOC104452959 isoform X1 | ||||
TrEMBL | A0A059BC20 | 0.0 | A0A059BC20_EUCGR; Uncharacterized protein | ||||
STRING | XP_010065761.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM27787 | 2 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17980.1 | 9e-24 | NAC domain containing protein 71 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.G01052.1.p |
Entrez Gene | 104452959 |