PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G01049.1.p
Common NameEUGRSUZ_G01049
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 469aa    MW: 53106.4 Da    PI: 6.9411
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G01049.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM91.21.8e-28531803127
               NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgy.Wkatg 87 
                        GfrF Pt+eel+ +yLk  v+g + ++  +i+++ +iy+++PwdLp+       v ++++ew+f +++ ++    +r +r+t  g  W+ tg
  Eucgr.G01049.1.p  53 DGFRFCPTEEELL-NYLKLTVSGCRESF-CIIPTLeNIYEINPWDLPAkfseksVVPSKDQEWWFICPQTQS----QRISRKTPCGSsWNITG 139
                       6************.9**********888.66887779**********63666554455899******98775....588888775544***** PP

               NAM  88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                       k+k++++k +++++g k +Lvf++g+++kg++++Wvmhe +
  Eucgr.G01049.1.p 140 KHKDIKAKnDNKKIGSKIILVFHDGQNSKGTRSKWVMHELH 180
                       ******9977888**************************76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100531.91251196IPR003441NAC domain
SuperFamilySSF1019412.22E-2852196IPR003441NAC domain
PfamPF023656.5E-1454180IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    Send to blast
MKKPKALPPS LSTQEIEVCR RKQEMETRIY PMNILPAENE LTKIVLFLQQ AIDGFRFCPT  60
EEELLNYLKL TVSGCRESFC IIPTLENIYE INPWDLPAKF SEKSVVPSKD QEWWFICPQT  120
QSQRISRKTP CGSSWNITGK HKDIKAKNDN KKIGSKIILV FHDGQNSKGT RSKWVMHELH  180
PHPDNMGYVL CCLKMKQHGK ADNQEPSIQV RENQPNDAAM AMDGDIPSIP QFHCPEVSSS  240
EQNKVIAELS KKNYSKSDRS CQNKTKSLAP IHEDNNPFSQ SEGSYQNKTK SPALIHKDSH  300
PFSQSDGSYQ NNTNSLALIH QDNHPFSQSE GSYQNNTNSL ALIHEDNHPF SQSDGSYQNN  360
TKSPALIHKD SHPFSPNQEH PAWTKNSSST ANSSGSCLAV SEPSIHELHF PHPFPNFDDT  420
SGTSNFIGEQ ADKSCYSMDC ENPEQLPFAE VRKIRMLQRS NFFFFFNL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A8e-155419720166NO APICAL MERISTEM PROTEIN
1ut4_B8e-155419720166NO APICAL MERISTEM PROTEIN
1ut7_A8e-155419720166NO APICAL MERISTEM PROTEIN
1ut7_B8e-155419720166NO APICAL MERISTEM PROTEIN
3swm_A8e-155419723169NAC domain-containing protein 19
3swm_B8e-155419723169NAC domain-containing protein 19
3swm_C8e-155419723169NAC domain-containing protein 19
3swm_D8e-155419723169NAC domain-containing protein 19
3swp_A8e-155419723169NAC domain-containing protein 19
3swp_B8e-155419723169NAC domain-containing protein 19
3swp_C8e-155419723169NAC domain-containing protein 19
3swp_D8e-155419723169NAC domain-containing protein 19
4dul_A8e-155419720166NAC domain-containing protein 19
4dul_B8e-155419720166NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G01049.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010065753.10.0PREDICTED: uncharacterized protein LOC104452955 isoform X1
TrEMBLA0A059BBC00.0A0A059BBC0_EUCGR; Uncharacterized protein
STRINGXP_010065753.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.34e-21NAC transcription factor-like 9