PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.G01047.1.p | ||||||||
Common Name | EUGRSUZ_G01047, LOC104452956 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 567aa MW: 63724.2 Da PI: 4.9366 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 99 | 6.6e-31 | 29 | 156 | 3 | 127 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgy.Wkatg 87 +G+rFhPt+eel+ +yLk kv+g + ++ +i+++ +iy+++PwdLp+ ++++++ew+f +++ ++ +r +r+t g+ Wk tg Eucgr.G01047.1.p 29 VGYRFHPTEEELI-NYLKSKVTGCRETF-CIIPTLeNIYEINPWDLPAkfnensIIRSKDQEWWFICPQTQN----QRISRKTPCGFsWKITG 115 7************.9*********9777.66888779**********63666665566999******98774....6999*9999999***** PP NAM 88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 k+ ++++k +++++g k tLvf +gr++kg++++Wv+he++ Eucgr.G01047.1.p 116 KHIDIKAKtDDKKIGSKITLVFIDGRNSKGTRSNWVLHEFH 156 *****99978899***************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.98E-31 | 24 | 162 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 31.299 | 27 | 172 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.4E-15 | 29 | 156 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 567 aa Download sequence Send to blast |
MESRISPMNQ QPAEKVVTEI ALLLQQAIVG YRFHPTEEEL INYLKSKVTG CRETFCIIPT 60 LENIYEINPW DLPAKFNENS IIRSKDQEWW FICPQTQNQR ISRKTPCGFS WKITGKHIDI 120 KAKTDDKKIG SKITLVFIDG RNSKGTRSNW VLHEFHPHPD DTGFVIYCLK MKQNEKADNY 180 AAVATNGDFS STPQFQNHKV SFSEPNEVIS KLSDEVYSKS DGSYQNRTKS LALIQEDNHH 240 SSPNQEHLVG TKDPSSTENS SGRGLSVPDP TNDELNFPHP FLNVDVCSAN EADKETINQQ 300 VAELVRSTEE KVDEMSGEQA DKSCDSMDCD NPGQLLFAEH HVQEMQNELN DLIMNGSSNE 360 WSRIEPSMSP LGHDLFPNGD LFGLNDRIRE TGADIGVIQY GQLGETSWDN CWAKKNQRPV 420 CDTLEGAVPG EEKGFTEEKL NHPHDTEKII TECTSSDGAP AKGKAQAGEF KEKETTMIRP 480 QEKNFEMKIE SDNMFHGESW TESLSPTRSI PSTSCSCRNR PTIDPAVYFA RLMALVLVVG 540 LIVDGICRKS DGISEIKKVY VFYGRI* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 4e-15 | 30 | 156 | 20 | 141 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-15 | 30 | 156 | 20 | 141 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-15 | 30 | 156 | 20 | 141 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-15 | 30 | 156 | 20 | 141 | NO APICAL MERISTEM PROTEIN |
4dul_A | 4e-15 | 30 | 156 | 20 | 141 | NAC domain-containing protein 19 |
4dul_B | 4e-15 | 30 | 156 | 20 | 141 | NAC domain-containing protein 19 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.G01047.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010065754.1 | 0.0 | PREDICTED: NAC domain-containing protein 101 isoform X1 | ||||
TrEMBL | A0A059BCL2 | 0.0 | A0A059BCL2_EUCGR; Uncharacterized protein | ||||
STRING | XP_010065754.1 | 0.0 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17980.1 | 9e-24 | NAC domain containing protein 71 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.G01047.1.p |
Entrez Gene | 104452956 |