PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.G00258.1.p | ||||||||
Common Name | EUGRSUZ_G00258 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | WRKY | ||||||||
Protein Properties | Length: 258aa MW: 28598.9 Da PI: 7.5026 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.7 | 1.5e-30 | 120 | 177 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 dDg++WrKYGqKe+ gs++pr YYrCt+ gC++kk+v+rs++dp+v+ei+Y+g+H++ Eucgr.G00258.1.p 120 DDGFSWRKYGQKEILGSKYPREYYRCTHVqGCWAKKQVQRSDDDPTVFEIMYRGRHTC 177 8***************************99**************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.2E-29 | 106 | 177 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.27E-26 | 114 | 177 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.7E-37 | 119 | 179 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 21.964 | 120 | 175 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.1E-27 | 120 | 177 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence Send to blast |
MEDWEKMNLP NELIQGRELT KQLQRQLHLA VSSSSSSSHE QTQEMLIRGI PTSYDKALSM 60 LNAEPPAGGC PRRLSVSPPS LGGSPMSRGD SDRNLDDGST PRKREAMQRW TERVRAPTPD 120 DGFSWRKYGQ KEILGSKYPR EYYRCTHVQG CWAKKQVQRS DDDPTVFEIM YRGRHTCIDH 180 PATVVPSSPL PENQTDSNAS IDDAPLQIRE LPVYVSAATS GKNSQATAFA TVDNRPQVRW 240 GLIGLERGST LLGSGEA* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 7e-19 | 120 | 177 | 9 | 68 | OsWRKY45 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.G00258.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018732490.1 | 1e-143 | PREDICTED: probable WRKY transcription factor 8 | ||||
TrEMBL | A0A059B9V8 | 0.0 | A0A059B9V8_EUCGR; Uncharacterized protein | ||||
STRING | XP_010068016.1 | 1e-159 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1933 | 27 | 83 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.1 | 3e-38 | WRKY family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.G00258.1.p |