PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.G00254.1.p | ||||||||
Common Name | EUGRSUZ_G00254 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | WRKY | ||||||||
Protein Properties | Length: 141aa MW: 15796.8 Da PI: 9.5827 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 30.9 | 5.4e-10 | 120 | 140 | 2 | 22 |
--SS-EEEEEEE--TT-SS-E CS WRKY 2 dDgynWrKYGqKevkgsefpr 22 dDg++WrKYGqKe+ g+++pr Eucgr.G00254.1.p 120 DDGFSWRKYGQKEILGAKYPR 140 8*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.1E-8 | 106 | 140 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.44E-7 | 114 | 140 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.5E-7 | 120 | 140 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 10.131 | 120 | 140 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence Send to blast |
MEDWEKMNLP NELIQGRELT KQLQRQLHLA VSSSSSSSHE QTQEMLIRGI LTSYDEALSM 60 LNAEPPVGGC PRRLSVSPPS LGGNPMSRGD SDRNLDDGST PRKRKAMQKW TERVRAPTPD 120 DGFSWRKYGQ KEILGAKYPR * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.G00254.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018732490.1 | 4e-98 | PREDICTED: probable WRKY transcription factor 8 | ||||
TrEMBL | A0A059B989 | 1e-98 | A0A059B989_EUCGR; Uncharacterized protein | ||||
STRING | XP_010068012.1 | 2e-91 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1933 | 27 | 83 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.1 | 8e-23 | WRKY family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.G00254.1.p |