PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.F04341.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 303aa MW: 33773.6 Da PI: 6.9416 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 163.8 | 6.4e-51 | 7 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv++yL ++++++++ + +i+e+d+yk++PwdLp + +ekew+fFs+rd+ky++g+r+nra+ sgyWkatg dk++ Eucgr.F04341.1.p 7 LPPGFRFHPTDEELVMHYLVRRCTSQPIAV-PIIAELDLYKHDPWDLPGLALYGEKEWFFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIG 98 79**************************99.88***************6555679*************************************9 PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s + vg+kk Lvfy g+ap+g kt+W+mheyrl Eucgr.F04341.1.p 99 S--PKPVGIKKALVFYAGKAPRGDKTNWIMHEYRL 131 9..789***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.27E-62 | 4 | 157 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 60.431 | 7 | 157 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.9E-27 | 8 | 131 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009611 | Biological Process | response to wounding | ||||
GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence Send to blast |
MTVDMELPPG FRFHPTDEEL VMHYLVRRCT SQPIAVPIIA ELDLYKHDPW DLPGLALYGE 60 KEWFFFSPRD RKYPNGSRPN RAAGSGYWKA TGADKPIGSP KPVGIKKALV FYAGKAPRGD 120 KTNWIMHEYR LADVDRSIRK KNSLRLDDWV LCRIYNKKGA IEKKQPHVQP QPPPVPAPAP 180 APVAIQSLGP AAASSFTEYE DEKPPVLTMP ALPPPPPPVL NDLVHFDTSD SVPRLHTDSS 240 CSEHVVTPEL ACEVQSEPRW KNEWESMLDF GGGCSYGYFT GGAAAGQMSP LQDMFMYLQK 300 PF* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 5e-76 | 3 | 163 | 11 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00121 | DAP | Transfer from AT1G01720 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.F04341.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010063945.1 | 0.0 | PREDICTED: NAC domain-containing protein 2 | ||||
Swissprot | Q39013 | 1e-140 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A2I0KEC7 | 1e-148 | A0A2I0KEC7_PUNGR; Uncharacterized protein | ||||
STRING | XP_010063945.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM190 | 28 | 276 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-129 | NAC family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.F04341.1.p |