PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.F02976.1.p
Common NameEUGRSUZ_F02976, LOC104452015
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 189aa    MW: 19858.2 Da    PI: 5.3324
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.F02976.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.3e-192372255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +ykGVr++k +g+Wv+eIr+p   gk++r++lg++ ++e+Aa+a++ a++ l+g
  Eucgr.F02976.1.p 23 RYKGVRRRK-WGKWVSEIREP---GKKTRIWLGSYESPEMAAAAYDVAARHLRG 72
                      6*****998.**********8...557*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.21E-192282No hitNo description
Gene3DG3DSA:3.30.730.101.9E-302381IPR001471AP2/ERF domain
PfamPF008478.9E-132372IPR001471AP2/ERF domain
SMARTSM003801.0E-352386IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-222381IPR016177DNA-binding domain
PROSITE profilePS5103223.0372380IPR001471AP2/ERF domain
PRINTSPR003678.7E-122435IPR001471AP2/ERF domain
PRINTSPR003678.7E-126282IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MKGMQAGGDQ CGGDNDNAPC AARYKGVRRR KWGKWVSEIR EPGKKTRIWL GSYESPEMAA  60
AAYDVAARHL RGPGAALNFP ELVEALPKPA GSSSEAVQMA AQEAALRFRR AEGGPGASGG  120
DGHSTGNRSS GPARVGLSPS QIEAINEAPL DSPKMWMELG AGADSAAAFD LGDMEVDQWG  180
MLQQSIWD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-152485668ATERF1
3gcc_A6e-152485668ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12430KGVRRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.F02976.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010064857.11e-134PREDICTED: ethylene-responsive transcription factor ERF022
TrEMBLA0A059BV841e-133A0A059BV84_EUCGR; Uncharacterized protein
STRINGXP_010064857.11e-133(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.12e-50ERF family protein