PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.F02974.1.p | ||||||||
Common Name | EUGRSUZ_F02974, LOC104449820 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | ERF | ||||||||
Protein Properties | Length: 179aa MW: 19248.3 Da PI: 4.5998 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.6 | 7.2e-19 | 13 | 63 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 sgy+GVr +k +g+Wv+e+r+p g ++r++lg+f t+e+Aa+a++ a++ ++g Eucgr.F02974.1.p 13 SGYRGVRKRK-WGKWVSEVREP---GTKTRIWLGSFETPEMAAAAYDVAALHFRG 63 89*****999.*******9998...435***********************9998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 2.48E-22 | 13 | 72 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 3.0E-12 | 13 | 63 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 6.26E-22 | 13 | 73 | No hit | No description |
PROSITE profile | PS51032 | 23.459 | 14 | 71 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.1E-35 | 14 | 77 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.5E-10 | 15 | 26 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.4E-31 | 15 | 72 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.5E-10 | 37 | 53 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence Send to blast |
MEDGRSSRGG TRSGYRGVRK RKWGKWVSEV REPGTKTRIW LGSFETPEMA AAAYDVAALH 60 FRGRGARLNF PELMDSLPRP AGSSPEDVRA AAHEAAARLR MAPAAAPESE DVGGSGGSGG 120 SDPAPLTVRL SPSQIQAINE STLDSPKMWM QMGEDLLAPD CSNNDVEEDD FEDSLWDL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 2e-15 | 15 | 76 | 6 | 68 | ATERF1 |
3gcc_A | 2e-15 | 15 | 76 | 6 | 68 | ATERF1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00227 | DAP | Transfer from AT1G71450 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.F02974.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010062393.1 | 1e-126 | PREDICTED: ethylene-responsive transcription factor ERF021 | ||||
Swissprot | Q9C9I2 | 2e-57 | ERF21_ARATH; Ethylene-responsive transcription factor ERF021 | ||||
TrEMBL | A0A059BTG3 | 1e-125 | A0A059BTG3_EUCGR; Uncharacterized protein | ||||
STRING | XP_010062393.1 | 1e-126 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM10 | 28 | 1650 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71450.1 | 1e-48 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.F02974.1.p |
Entrez Gene | 104449820 |