PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.F02771.2.p
Common NameEUGRSUZ_F02771
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 529aa    MW: 59491.1 Da    PI: 4.37
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.F02771.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.83.7e-52211472128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                       ppGfrFhPtdeelv +yLk+k+ ++kl+l ++i+e+d+yk++P++Lp +  +k+++++w+fFs+rd+ky++  r+nrat++gyWkatgkd+++
  Eucgr.F02771.2.p  21 PPGFRFHPTDEELVLYYLKRKICRRKLRL-NIIPELDVYKWDPEELPgQsLLKNGDRQWFFFSHRDRKYPNAARSNRATRHGYWKATGKDRNI 112
                       8***************************9.89**************96347788999************************************ PP

               NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        s +g++vg+kktLvfy grap+ge+tdWvmhey+l
  Eucgr.F02771.2.p 113 AS-NGRAVGVKKTLVFYIGRAPNGERTDWVMHEYTL 147
                       **.999****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-6016170IPR003441NAC domain
PROSITE profilePS5100555.4820170IPR003441NAC domain
PfamPF023651.1E-2721147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0070301Biological Processcellular response to hydrogen peroxide
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 529 aa     Download sequence    Send to blast
MTVEADASPA VVRRSERVSW PPGFRFHPTD EELVLYYLKR KICRRKLRLN IIPELDVYKW  60
DPEELPGQSL LKNGDRQWFF FSHRDRKYPN AARSNRATRH GYWKATGKDR NIASNGRAVG  120
VKKTLVFYIG RAPNGERTDW VMHEYTLDEE ELKRCQNVQD YYALYKVFKK SGPGPKNGEQ  180
YGAPFKEEDW ADDDYSAVTK VVDQEICPKE LPPVSSVDIV GNNNQVLPPA NDIEEFFKEI  240
AEEPELEQPR YNNCDYLLPQ EEAQSTLVDQ SSREVVASEP LFAYGPSTPW NGSLANIDLT  300
QFGASQWQQV QEASETTLAP ECGTLETRVS EDFLEIDDLN NNDPSFFAKE KPAEDLQFND  360
LDGLSELDMF HDAAMFLRDI GSMNHEDGGA AQMNCFDNGL INQYNHHQQP PISNVVEQTT  420
SQLWVHEQTF EGYTSAEVVH GVQPCPSGFV GGSSSLPNES SQNQIEEGGG VMSGFSSAIW  480
DFVDSIPTTP ASASENAIMR VLLRVMQSSS PVGGDSFCFL LLVCWVLF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-481717014165NO APICAL MERISTEM PROTEIN
1ut4_B1e-481717014165NO APICAL MERISTEM PROTEIN
1ut7_A1e-481717014165NO APICAL MERISTEM PROTEIN
1ut7_B1e-481717014165NO APICAL MERISTEM PROTEIN
3swm_A1e-481717617174NAC domain-containing protein 19
3swm_B1e-481717617174NAC domain-containing protein 19
3swm_C1e-481717617174NAC domain-containing protein 19
3swm_D1e-481717617174NAC domain-containing protein 19
3swp_A1e-481717617174NAC domain-containing protein 19
3swp_B1e-481717617174NAC domain-containing protein 19
3swp_C1e-481717617174NAC domain-containing protein 19
3swp_D1e-481717617174NAC domain-containing protein 19
4dul_A1e-481717014165NAC domain-containing protein 19
4dul_B1e-481717014165NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00179DAPTransfer from AT1G34190Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.F02771.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010062193.10.0PREDICTED: NAC domain-containing protein 17
TrEMBLA0A059BSM40.0A0A059BSM4_EUCGR; Uncharacterized protein
STRINGXP_010062193.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.11e-109NAC domain containing protein 17