PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.F02771.1.p | ||||||||
Common Name | EUGRSUZ_F02771, LOC104449658 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 566aa MW: 63309.5 Da PI: 4.5465 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 167.6 | 4.2e-52 | 21 | 147 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 ppGfrFhPtdeelv +yLk+k+ ++kl+l ++i+e+d+yk++P++Lp + +k+++++w+fFs+rd+ky++ r+nrat++gyWkatgkd+++ Eucgr.F02771.1.p 21 PPGFRFHPTDEELVLYYLKRKICRRKLRL-NIIPELDVYKWDPEELPgQsLLKNGDRQWFFFSHRDRKYPNAARSNRATRHGYWKATGKDRNI 112 8***************************9.89**************96347788999************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 s +g++vg+kktLvfy grap+ge+tdWvmhey+l Eucgr.F02771.1.p 113 AS-NGRAVGVKKTLVFYIGRAPNGERTDWVMHEYTL 147 **.999****************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.09E-60 | 16 | 170 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 55.48 | 20 | 170 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.2E-27 | 21 | 147 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0070301 | Biological Process | cellular response to hydrogen peroxide | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005789 | Cellular Component | endoplasmic reticulum membrane | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 566 aa Download sequence Send to blast |
MTVEADASPA VVRRSERVSW PPGFRFHPTD EELVLYYLKR KICRRKLRLN IIPELDVYKW 60 DPEELPGQSL LKNGDRQWFF FSHRDRKYPN AARSNRATRH GYWKATGKDR NIASNGRAVG 120 VKKTLVFYIG RAPNGERTDW VMHEYTLDEE ELKRCQNVQD YYALYKVFKK SGPGPKNGEQ 180 YGAPFKEEDW ADDDYSAVTK VVDQEICPKE LPPVSSVDIV GNNNQVLPPA NDIEEFFKEI 240 AEEPELEQPR YNNCDYLLPQ EEAQSTLVDQ SSREVVASEP LFAYGPSTPW NGSLANIDLT 300 QFGASQWQQV QEASETTLAP ECGTLETRVS EDFLEIDDLN NNDPSFFAKE KPAEDLQFND 360 LDGLSELDMF HDAAMFLRDI GSMNHEDGGA AQMNCFDNGL INQYNHHQQP PISNVVEQTT 420 SQLWVHEQTF EGYTSAEVVH GVQPCPSGFV GGSSSLPNES SQNQIEEGGG VMSGFSSAIW 480 DFVDSIPTTP ASASENAIVS RALGRMSSFS RLKVYSVSAD ASAVKGDAVV KSSRRGFFLL 540 FVIGVLGAIL GVLIGSMRLW ERFVS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-48 | 17 | 170 | 14 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-48 | 17 | 170 | 14 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-48 | 17 | 170 | 14 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-48 | 17 | 170 | 14 | 165 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-48 | 17 | 170 | 17 | 168 | NAC domain-containing protein 19 |
3swm_B | 2e-48 | 17 | 170 | 17 | 168 | NAC domain-containing protein 19 |
3swm_C | 2e-48 | 17 | 170 | 17 | 168 | NAC domain-containing protein 19 |
3swm_D | 2e-48 | 17 | 170 | 17 | 168 | NAC domain-containing protein 19 |
3swp_A | 2e-48 | 17 | 170 | 17 | 168 | NAC domain-containing protein 19 |
3swp_B | 2e-48 | 17 | 170 | 17 | 168 | NAC domain-containing protein 19 |
3swp_C | 2e-48 | 17 | 170 | 17 | 168 | NAC domain-containing protein 19 |
3swp_D | 2e-48 | 17 | 170 | 17 | 168 | NAC domain-containing protein 19 |
4dul_A | 1e-48 | 17 | 170 | 14 | 165 | NAC domain-containing protein 19 |
4dul_B | 1e-48 | 17 | 170 | 14 | 165 | NAC domain-containing protein 19 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00179 | DAP | Transfer from AT1G34190 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.F02771.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010062193.1 | 0.0 | PREDICTED: NAC domain-containing protein 17 | ||||
TrEMBL | A0A059BT36 | 0.0 | A0A059BT36_EUCGR; Uncharacterized protein | ||||
STRING | XP_010062193.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM2812 | 26 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34190.1 | 1e-113 | NAC domain containing protein 17 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.F02771.1.p |
Entrez Gene | 104449658 |