PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.F02630.1.p
Common NameEUGRSUZ_F02630, LOC104449532
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family GRAS
Protein Properties Length: 471aa    MW: 53977.4 Da    PI: 7.767
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.F02630.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS317.52.7e-97904661373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lLl  A+av+++++ la   La+l + +s +gd++qR++ayf+ +Laarl+   s   + +  ++t     +ee+ a+++++ vsP+++f
  Eucgr.F02630.1.p  90 LIHLLLITATAVDENNAGLALDNLAELYQSVSLTGDSVQRVVAYFADGLAARLLTRKSPFHDMIMKRPT----CEEEFVAFTYLYRVSPYYQF 178
                       689***************************************************977777776666666....68999999************ PP

              GRAS  94 shltaNqaIleavegeerv.....HiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfef 178
                       +h+taNqaIlea+e+ee+v     H+iDfd+s+G+QWp+L+q+L++++  +++ slRiTg+g+    s eel+et+ rL +f + + ++ fef
  Eucgr.F02630.1.p 179 AHFTANQAILEAFEREEQVnhhalHVIDFDVSYGFQWPSLIQSLSDKAtsGNKISLRITGFGR----SPEELQETEGRLVSFSKGFkNIVFEF 267
                       ****************66666666*********************999756667*********....9****************9857***** PP

              GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
                       + l    l   +l +Lr k++E++aVnlv++l  l  + ++    ++e+Lk v s +P +v +veqe +++  sFl rf+e+l+y++a+fdsl
  Eucgr.F02630.1.p 268 QGL----LRGSKLVNLRKKKQETVAVNLVFHLNMLS-NFAK----ISETLKSVHSFKPSIVMLVEQEGNRSPRSFLSRFMESLHYFAAMFDSL 351
                       **8....66667789***************999886.3333....457********************************************* PP

              GRAS 272 eaklpreseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllr........kvk..sdgyrvee 353
                       +  lp es+er ++E+  lg+ei+     e+++ r +r e++e+W+ r+e+ GF  v+ls+k + qaklllr        +++  + g+rv e
  Eucgr.F02630.1.p 352 DDCLPLESSERLSIEKNHLGKEIKTRMNYEKDDrRCARYERMETWKGRMEAHGFAGVKLSSKSMLQAKLLLRirahhrplQFEgeNSGFRVIE 444
                       ******************************9995779**********************************8322222221221234566654 PP

              GRAS 354 e.sgslv.lgWkdrpLvsvSaW 373
                       + +g ++ lgW+dr+L+++SaW
  Eucgr.F02630.1.p 445 RdEGRAIsLGWQDRSLITASAW 466
                       43666667************** PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098549.5364435IPR005202Transcription factor GRAS
PfamPF035149.4E-9590466IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    Send to blast
MEETEDQEEL LNLSLAIVSS GYGDETRLRK RKRSMSRDDN DVISNSSDAF EGCEGKIFKL  60
LQMREEMLHT KHKRSKQISP HHEDGKGLHL IHLLLITATA VDENNAGLAL DNLAELYQSV  120
SLTGDSVQRV VAYFADGLAA RLLTRKSPFH DMIMKRPTCE EEFVAFTYLY RVSPYYQFAH  180
FTANQAILEA FEREEQVNHH ALHVIDFDVS YGFQWPSLIQ SLSDKATSGN KISLRITGFG  240
RSPEELQETE GRLVSFSKGF KNIVFEFQGL LRGSKLVNLR KKKQETVAVN LVFHLNMLSN  300
FAKISETLKS VHSFKPSIVM LVEQEGNRSP RSFLSRFMES LHYFAAMFDS LDDCLPLESS  360
ERLSIEKNHL GKEIKTRMNY EKDDRRCARY ERMETWKGRM EAHGFAGVKL SSKSMLQAKL  420
LLRIRAHHRP LQFEGENSGF RVIERDEGRA ISLGWQDRSL ITASAWHCVW *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3g_A7e-54744663378Protein SCARECROW
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.F02630.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010062016.10.0PREDICTED: scarecrow-like protein 21
TrEMBLA0A059BT150.0A0A059BT15_EUCGR; Uncharacterized protein
STRINGXP_010062016.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM15761916
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G04890.11e-57SCARECROW-like 21