PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.F02399.1.p | ||||||||
Common Name | EUGRSUZ_F02399, LOC104449365 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 586aa MW: 65917 Da PI: 9.3716 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 54.7 | 1.8e-17 | 21 | 108 | 4 | 99 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 + s++ +s+rl +p kf+++++g s le +sg++W v+l + +l +GW +F +++ + +gD +vF++dg+ f +v+v Eucgr.F02399.1.p 21 IY--SSSVSSRRLKIPDKFVKHMEGW--MSGLALLEGPSGNTWHVEL--IEENHELFLNSGWHSFIRDHSIVSGDLLVFRHDGNLHF--YVQV 105 44..77777889********777666..4448999************..6666779************************9886666..9999 PP E-S CS B3 97 frk 99 f++ Eucgr.F02399.1.p 106 FEQ 108 986 PP | |||||||
2 | B3 | 49.4 | 8.3e-16 | 254 | 337 | 11 | 97 |
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 + s l +p +f eh +++t++l++++g+sW+v+ ++ ++++ +GW Fv+ang++ D++vF+l+++ e ++v+++ Eucgr.F02399.1.p 254 SGSYTLNIPYQFSMEHLP--VSKITIVLRNLKGESWTVNSVPtTRVHTSHTFCGGWMAFVRANGIELEDVCVFELVRKCE--MRVHIL 337 4556799*****999963..4779***************954566666799999********************998443..577765 PP | |||||||
3 | B3 | 51.3 | 2.2e-16 | 466 | 557 | 2 | 96 |
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 + ++++ +v+ s l +p +f +h ++++++l++++g+sW+v+ + k+++ +++ +GW +Fv+ ng+k gD+++F+l+g + e++ Eucgr.F02399.1.p 466 VRIMKRFNVSGSYTLKIPHQFSMDHLP--ICKTEIVLRNLEGESWTVNSVPDSKGRMlHTFCGGWLSFVRGNGIKIGDTCIFELVG--KLEMR 554 56677778888899*******989964..48889***************7777777789999*********************988..66677 PP EEE CS B3 94 vkv 96 v++ Eucgr.F02399.1.p 555 VHI 557 776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 9.61E-23 | 12 | 111 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 8.0E-23 | 13 | 110 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 14.339 | 16 | 109 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 8.50E-17 | 16 | 106 | No hit | No description |
SMART | SM01019 | 2.1E-13 | 18 | 109 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 3.9E-15 | 20 | 108 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 9.8E-23 | 236 | 339 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 1.14E-23 | 237 | 338 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 1.36E-19 | 242 | 337 | No hit | No description |
PROSITE profile | PS50863 | 12.929 | 244 | 340 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 1.6E-13 | 244 | 340 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 2.2E-12 | 247 | 337 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 1.7E-21 | 457 | 558 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 2.94E-23 | 459 | 559 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 8.13E-20 | 463 | 557 | No hit | No description |
PROSITE profile | PS50863 | 13.592 | 465 | 561 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 1.9E-13 | 465 | 561 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 3.9E-14 | 465 | 557 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 586 aa Download sequence Send to blast |
MERDETRWKM PNGKRPHFFE IYSSSVSSRR LKIPDKFVKH MEGWMSGLAL LEGPSGNTWH 60 VELIEENHEL FLNSGWHSFI RDHSIVSGDL LVFRHDGNLH FYVQVFEQSS CEKEAAFHAM 120 CSQDPSSCRQ NGERNGERNE ITYCSNIVYE SHKPKVCACD DKLGRKQDAV TSAQHRGTSI 180 VRETPHDNII LSSKAQVYEE SPDIRNRFSK GDHSSLSTSC HMLKSLSEEE RKVARSFSSH 240 FPYFVRIMKK FNISGSYTLN IPYQFSMEHL PVSKITIVLR NLKGESWTVN SVPTTRVHTS 300 HTFCGGWMAF VRANGIELED VCVFELVRKC EMRVHILGAA QGRPDCQSVK KTLTWLDVRN 360 TATLNAGREN VSKKRKRKST KVSSQIVEKV KRMLQEASSS DMKKHAGAFK GSSNALKTSN 420 GKSAIIVGAS TGTARSSQNT DCLSVMLSLQ EERVARSFAS SFPKFVRIMK RFNVSGSYTL 480 KIPHQFSMDH LPICKTEIVL RNLEGESWTV NSVPDSKGRM LHTFCGGWLS FVRGNGIKIG 540 DTCIFELVGK LEMRVHISED GNKEQAQQHG KVDGVLVPLA ASVDN* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 372 | 377 | KKRKRK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.F02399.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010061801.1 | 0.0 | PREDICTED: B3 domain-containing protein Os11g0197600 | ||||
TrEMBL | A0A059BRQ9 | 0.0 | A0A059BRQ9_EUCGR; Uncharacterized protein | ||||
STRING | XP_010061800.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM16907 | 9 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 1e-22 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.F02399.1.p |
Entrez Gene | 104449365 |