PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.F01538.1.p
Common NameEUGRSUZ_F01538, LOC104448728
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 402aa    MW: 44498.9 Da    PI: 5.1816
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.F01538.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM39.41.8e-121811711128
               NAM  11 deelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglk 103
                       +eel  +++   ++++ +++ +vi++v+ +++ P++Lp      e+ wyf           + +nr ++ g+W   g+ +e++  +    g  
  Eucgr.F01538.1.p  18 NEELF-KFMFCMARADFFPA-NVITDVNPFNCLPETLP------ENTWYFTN---------SMENRGAEGGFWMPRGEPREIFG-DAFINGWE 92 
                       56666.66666666666777.89**************9......46788743.........356898899**************.9999**** PP

               NAM 104 ktLvfykgrapkgektdWvmheyrl 128
                       +t  fy+gr pk ekt+W+m ey +
  Eucgr.F01538.1.p  93 ETHEFYEGRGPKVEKTNWLMLEYYM 117
                       ***********************76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100524.0268140IPR003441NAC domain
SuperFamilySSF1019413.66E-2114140IPR003441NAC domain
PfamPF023654.2E-532116IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MCPPAVAPLF DIKYISSNEE LFKFMFCMAR ADFFPANVIT DVNPFNCLPE TLPENTWYFT  60
NSMENRGAEG GFWMPRGEPR EIFGDAFING WEETHEFYEG RGPKVEKTNW LMLEYYMTSK  120
VSGAALSARD AKSLCKVFRS GSLPLSNSEM LQNAAGTEFR RENYLYSLSP DNFNIPTEQC  180
VTNQMQVNTT SCNVMRRASS FFLSHPIESL PELGHINPGD YLELLDLGIP QSPSSQSDNS  240
SCMTMLSDEI FDYLVAMLDS EVESGEHVEH RDAGCNLNVT DSSKPDDVVV QAAISGLPIK  300
ERSSQNARDG KPVNRDGSPP LTLASQSRQL SDSSQTPSAD GRNKTDGRLK KLKRKYLPTS  360
SSQSSDGSNS GRAPSPGPGG RRKTDGALKK LQKKYLCFMP F*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.F01538.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010060913.10.0PREDICTED: uncharacterized protein LOC104448728
TrEMBLA0A059BP340.0A0A059BP34_EUCGR; Uncharacterized protein
STRINGXP_010060913.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM137081023
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07680.25e-16NAC domain containing protein 80