PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Eucgr.E04373.1.p | ||||||||
Common Name | EUGRSUZ_E04373 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 285aa MW: 31714.1 Da PI: 8.4784 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 31.1 | 4.1e-10 | 161 | 255 | 3 | 84 |
EE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTH.HHHHHHHT--TT-EEEE CS B3 3 kvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesg.rsWevkliyrkksgryvltkGW.keFvkangLkegDfvvF 82 k lt+sd + +rl + ++ +++h + ++ ++ +++++d + + ++ + ++ +sg+yvl++GW keFvk gL +gD v + Eucgr.E04373.1.p 161 KRLTQSDLGHMSRLLIGRDSVKSHflrwvneetarQVESSKGADVIVRDMDTcSEHRLVFVFWASSGSYVLKGGWiKEFVKRRGLAVGDEVGI 253 889***********************999888877444457788999996666778888888*************999***********8877 PP EE CS B3 83 kl 84 + Eucgr.E04373.1.p 254 YW 255 74 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 2.75E-13 | 159 | 268 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 1.0E-13 | 159 | 271 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 7.74E-16 | 160 | 267 | No hit | No description |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 285 aa Download sequence Send to blast |
MCDVLRGDVH SPLSMDSSPS RVSYLKDHEK EKPIGDHLRS EVHSLASIDS SSCLSYLQDQ 60 EKNGDEGATG ISSAGVVASR EFFLLAPDQN TKEVGHPRQE IVPAQLKRKS MASLTNAESL 120 TVEKKAKCKR TQKGKKVASG CDAEEVSTEL TLLFDPYKVK KRLTQSDLGH MSRLLIGRDS 180 VKSHFLRWVN EETARQVESS KGADVIVRDM DTCSEHRLVF VFWASSGSYV LKGGWIKEFV 240 KRRGLAVGDE VGIYWEPIAS KFHFSLLHKS GSMSLDFFVK FSVW* |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Eucgr.E04373.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_010058716.1 | 1e-159 | PREDICTED: uncharacterized protein LOC104446575 | ||||
TrEMBL | A0A059CCG1 | 0.0 | A0A059CCG1_EUCGR; Uncharacterized protein | ||||
STRING | XP_010058714.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM456 | 9 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G33720.1 | 8e-28 | B3 family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | Eucgr.E04373.1.p |