PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.E04371.1.p | ||||||||
Common Name | EUGRSUZ_E04371 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 260aa MW: 28907.8 Da PI: 7.3462 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 31.1 | 4.2e-10 | 151 | 244 | 3 | 83 |
EE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTH.HHHHHHHT--TT-EEEE CS B3 3 kvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesg.rsWevkliyrkksgryvltkGW.keFvkangLkegDfvvF 82 k lt+sd + +rl + ++ +++h + ++ ++ +++++d + + ++ + ++ +sg+yvl++GW keFvk gL +gD v + Eucgr.E04371.1.p 151 KRLTQSDLGHMSRLLIGRDSVKSHflrwvneetarQVESSKGADVIVRDMDTcSEHRLVFVFWASSGSYVLKGGWiKEFVKRRGLAVGDEVGI 243 889***********************999888877444457788999996666778888888*************999***********8766 PP E CS B3 83 k 83 + Eucgr.E04371.1.p 244 Y 244 6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 4.12E-13 | 149 | 249 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 3.1E-13 | 149 | 250 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 1.51E-16 | 150 | 257 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence Send to blast |
MELVDSLAPK TATMCDVHSP LSMDSSPSRV SYLEDHEKKK PIGDHLRSKF HSPASMDSLS 60 CLSFLQDQEK SSQEKNGDEG ATGISSAGVV ASREFFLLAP DQNTKEVGHP RQEIVPAQLK 120 RKSTASLANA ESLIEVSTEL TLLFDPYKVK KRLTQSDLGH MSRLLIGRDS VKSHFLRWVN 180 EETARQVESS KGADVIVRDM DTCSEHRLVF VFWASSGSYV LKGGWIKEFV KRRGLAVGDE 240 VGIYWEPIAS KFHFSLLHK* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.E04371.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010058716.1 | 1e-158 | PREDICTED: uncharacterized protein LOC104446575 | ||||
TrEMBL | A0A059CAZ0 | 0.0 | A0A059CAZ0_EUCGR; Uncharacterized protein | ||||
STRING | XP_010058714.1 | 1e-161 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM456 | 9 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33720.1 | 7e-27 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.E04371.1.p |