PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.E03167.1.p | ||||||||
Common Name | EUGRSUZ_E03167 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | ERF | ||||||||
Protein Properties | Length: 251aa MW: 28002.6 Da PI: 4.9907 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.3 | 2.5e-20 | 107 | 157 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrd k +r++lg+f+taeeAa a+++a+++++g Eucgr.E03167.1.p 107 HYRGVRRRP-WGKYAAEIRDS---SrKGARVWLGTFDTAEEAALAYDKAALRIRG 157 7********.**********3...2234*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 6.3E-32 | 106 | 166 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 24.092 | 107 | 165 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.7E-37 | 107 | 171 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 3.4E-15 | 107 | 157 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.19E-24 | 107 | 167 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 4.67E-29 | 107 | 166 | No hit | No description |
PRINTS | PR00367 | 2.2E-11 | 108 | 119 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.2E-11 | 131 | 147 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence Send to blast |
MEKNLNSTAS EPILENVWAS FIGASPSEPS KTWEQLPGLD ERTGSVGMLQ RLPSLGRWVS 60 MGSEAWEEIL GEIIPGMAQS DVKDRTSGSC SEAEVTSPAA KAVIARHYRG VRRRPWGKYA 120 AEIRDSSRKG ARVWLGTFDT AEEAALAYDK AALRIRGPKA YLNFPIEQVV QAIHKDSRGC 180 NHALPILEEQ IVNPGKRTRE WERFDGGMMN EGRPLKRVER TEESRWIDEF DVVEFEDLGN 240 DLLDSLLSCL * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 2e-27 | 106 | 166 | 4 | 64 | ATERF1 |
3gcc_A | 2e-27 | 106 | 166 | 4 | 64 | ATERF1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.E03167.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010058963.1 | 1e-166 | PREDICTED: ethylene-responsive transcription factor ERF091 | ||||
TrEMBL | A0A059C8C6 | 0.0 | A0A059C8C6_EUCGR; Uncharacterized protein | ||||
STRING | XP_010059232.1 | 1e-169 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM10 | 28 | 1650 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18450.1 | 9e-33 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.E03167.1.p |