PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.E02754.1.p | ||||||||
Common Name | EUGRSUZ_E02754 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | G2-like | ||||||||
Protein Properties | Length: 191aa MW: 21601.7 Da PI: 5.8106 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 91.4 | 8e-29 | 93 | 144 | 2 | 53 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 prlrWtp+LH +Fv+ave+LGG+e+AtPk++l+ m+vkgL+++hvkSHLQ + Eucgr.E02754.1.p 93 PRLRWTPQLHYSFVRAVERLGGQERATPKSVLQQMNVKGLSINHVKSHLQIH 144 8*************************************************76 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.3E-26 | 89 | 146 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.11E-13 | 91 | 145 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 3.1E-20 | 93 | 143 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 2.4E-8 | 94 | 142 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence Send to blast |
MRSLESIEDH QEKSEEKGEK SSPAVSSQKL SSFDLNEEAT FDEHDSPAED DDLISDEDDN 60 SSIREAEDKP GNRNAESAET MKAVRQYVRS KMPRLRWTPQ LHYSFVRAVE RLGGQERATP 120 KSVLQQMNVK GLSINHVKSH LQIHQMTGPD HHFRIENGRI VLARNHCGDS NYSDSDFSRY 180 LYSKAIITAA * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 1e-16 | 94 | 142 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 1e-16 | 94 | 142 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 1e-16 | 94 | 142 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 1e-16 | 94 | 142 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 1e-16 | 94 | 142 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 1e-16 | 94 | 142 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 1e-16 | 94 | 142 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 1e-16 | 94 | 142 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 1e-16 | 94 | 142 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 1e-16 | 94 | 142 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 1e-16 | 94 | 142 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 1e-16 | 94 | 142 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.E02754.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010057109.1 | 1e-113 | PREDICTED: uncharacterized protein LOC104445014 | ||||
Refseq | XP_018728583.1 | 1e-113 | PREDICTED: uncharacterized protein LOC104445014 | ||||
Refseq | XP_018728584.1 | 1e-113 | PREDICTED: uncharacterized protein LOC104445014 | ||||
Refseq | XP_018728585.1 | 1e-113 | PREDICTED: uncharacterized protein LOC104445014 | ||||
TrEMBL | A0A059C6L8 | 1e-139 | A0A059C6L8_EUCGR; Uncharacterized protein | ||||
STRING | XP_010057109.1 | 1e-113 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM363 | 28 | 184 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38300.1 | 6e-30 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.E02754.1.p |