PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.E02744.4.p
Common NameEUGRSUZ_E02744, LOC104445002
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family C2H2
Protein Properties Length: 130aa    MW: 14801.9 Da    PI: 8.1476
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.E02744.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2120.000651939121
                      EEETTTTEEESSHHHHHHHHH CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHir 21
                      y+C++C +   +++n ++H r
  Eucgr.E02744.4.p 19 YRCKKCRRIVASQENIVSHER 39
                      9******************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    Send to blast
MEAVNSADTG FVPKPQVIYR CKKCRRIVAS QENIVSHERG KGEECFKWRK RTGDLKDWQK  60
DPAECSSIFV EPMKWMQAVE DGFVEEKLQC KGCNARLGSF NWAGMQCNCG AWVNPAFQLH  120
KSRIDECHT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6n8m_Y5e-2020126231343Tyrosine-protein phosphatase YVH1
6n8n_Y5e-2020126231343Tyrosine-protein phosphatase YVH1
6n8o_Y5e-2020126231343Tyrosine-protein phosphatase YVH1
6rzz_s5e-2020126231343Tyrosine-protein phosphatase YVH1
6s05_s5e-2020126231343Tyrosine-protein phosphatase YVH1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.E02744.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010057085.12e-93PREDICTED: probable inactive dual specificity protein phosphatase-like At4g18593
SwissprotQ570P76e-61DUSL1_ARATH; Probable inactive dual specificity protein phosphatase-like At4g18593
TrEMBLA0A059C6K15e-92A0A059C6K1_EUCGR; Uncharacterized protein
STRINGXP_010057080.19e-93(Eucalyptus grandis)