PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.E02078.1.p | ||||||||
Common Name | EUGRSUZ_E02078 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 149aa MW: 16873.6 Da PI: 9.5978 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 39.7 | 8.6e-13 | 37 | 142 | 3 | 96 |
EE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTH.HHHHHHHT--TT-EEEE CS B3 3 kvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltled.esgrsWevkliyrkksgryvltkGW.keFvkangLkegDfvvF 82 k+lt sd + ++rl lp ++++h + k+ee++ ++ +d +gr+ ++ ++ +k+ g+yvl +GW keFv++++Lk+gD + Eucgr.E02078.1.p 37 KKLTGSDLSPLSRLLLPAGCLQTHvfpqmdkkmlrQVKSEEGMPVVGKDvATGRKHQFVFRCWKSTGSYVLNGGWtKEFVEEKRLKVGDEIEM 129 89999********************9977766666555556666777776667998888888*************668***********7655 PP EE-SS.SEE..EEEE CS B3 83 kldgr.sefelvvkv 96 + s++ +++kv Eucgr.E02078.1.p 130 V--WVmSSRMFHFKV 142 5..444555556665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 1.2E-17 | 32 | 143 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 1.5E-17 | 35 | 142 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 1.5E-9 | 37 | 141 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 2.87E-11 | 89 | 143 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence Send to blast |
MKTPESSTSD VAHFVCAERV DVSTDLALYE DPWKIRKKLT GSDLSPLSRL LLPAGCLQTH 60 VFPQMDKKML RQVKSEEGMP VVGKDVATGR KHQFVFRCWK STGSYVLNGG WTKEFVEEKR 120 LKVGDEIEMV WVMSSRMFHF KVLHRAAA* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.E02078.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010058732.1 | 2e-82 | PREDICTED: gibberellin 2-beta-dioxygenase 8 | ||||
Refseq | XP_010058733.1 | 1e-82 | PREDICTED: B3 domain-containing protein At2g33720-like | ||||
TrEMBL | A0A059C513 | 1e-106 | A0A059C513_EUCGR; Uncharacterized protein | ||||
STRING | XP_010058732.1 | 9e-82 | (Eucalyptus grandis) | ||||
STRING | XP_010058733.1 | 5e-82 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM456 | 9 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33720.1 | 8e-16 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.E02078.1.p |