PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.E02075.1.p | ||||||||
Common Name | EUGRSUZ_E02075 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 238aa MW: 26639.1 Da PI: 6.511 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 30.9 | 4.9e-10 | 126 | 217 | 2 | 80 |
EEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTH.HHHHHHHT--TT-EE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesg.rsWevkliyrkksgryvltkGW.keFvkangLkegDfv 80 +k+l++sd ++++rl +p+ ++++ k++e+ ++++ de+ + ++ + y+ +sg+yvl+++W keFv+ gL egD + Eucgr.E02075.1.p 126 KKTLKKSDLGQLSRLLIPRAGVATYvlpcmdeerarRVKSNEGAEVVVWDEDThSEHQLVFAYWASSGSYVLKGCWmKEFVQRRGLAEGDEI 217 6999************************99988888444457889999998876666666677*************668***********65 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51257 | 5 | 1 | 34 | No hit | No description |
SuperFamily | SSF101936 | 3.53E-13 | 121 | 224 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 6.5E-14 | 124 | 222 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 5.00E-16 | 124 | 233 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence Send to blast |
MKLVDPFTLE LPPTGDVPRS ELHTLLPSIG SSSCVSHLHD HERNHKEEGR ETSSAAVVVP 60 ARVFFPLTPD PTRGYLDTKE LSAAPTRPER KSQKGKRGAS ECEAEEERCG DVSTEQVLRY 120 DPYHIKKTLK KSDLGQLSRL LIPRAGVATY VLPCMDEERA RRVKSNEGAE VVVWDEDTHS 180 EHQLVFAYWA SSGSYVLKGC WMKEFVQRRG LAEGDEIGIH WDPIASKFDF SLLHKAN* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.E02075.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010041685.1 | 1e-165 | PREDICTED: putative B3 domain-containing protein At1g78640 | ||||
TrEMBL | A0A059C5C5 | 1e-175 | A0A059C5C5_EUCGR; Uncharacterized protein | ||||
STRING | XP_010041685.1 | 1e-165 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM456 | 9 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33720.1 | 5e-24 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.E02075.1.p |