PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.E02057.1.p | ||||||||
Common Name | EUGRSUZ_E02057 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 258aa MW: 28766.7 Da PI: 8.9858 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 34.4 | 3.8e-11 | 146 | 255 | 2 | 99 |
EEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTH.HHHHHHHT--TT-EEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesg.rsWevkliyrkksgryvltkGW.keFvkangLkegDfvv 81 +k lt+sd + ++rl + ++f+++h + ++ ++ +++++d + + ++ + ++ +sg yvl++GW keFvk gL +gD v Eucgr.E02057.1.p 146 KKRLTQSDLGHLSRLLIRREFVKSHflrwmneetvrQVESGKGADVIVTDMDTcSEHRLVFVFWASSGCYVLKGGWiKEFVKRRGLVAGDEVG 238 5889************************98887777444557888999996666777888888*************999*************9 PP EEE-SSSEE..EEEEE-S CS B3 82 Fkldgrsefelvvkvfrk 99 ++ d +++++v+rk Eucgr.E02057.1.p 239 IYWDP-FASKFHFSVLRK 255 99553.444448888876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 2.16E-15 | 144 | 255 | IPR015300 | DNA-binding pseudobarrel domain |
SMART | SM01019 | 0.0015 | 145 | 256 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 1.38E-18 | 145 | 254 | No hit | No description |
Gene3D | G3DSA:2.40.330.10 | 2.2E-15 | 146 | 255 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 1.2E-7 | 147 | 254 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence Send to blast |
MGSSSSRVSH LQDHEQKPVG DHLRSEVHSP PPSMDSSSCL SSLHDQEKDR DEGARGTSFA 60 GVVVSREFFS VAPNRTTKEV GGPSQEIVPA QLKRKSVALP TDAETLIVEK KAKCKRTQKG 120 KKEASGCDAE EVSTELTLLF DPYKIKKRLT QSDLGHLSRL LIRREFVKSH FLRWMNEETV 180 RQVESGKGAD VIVTDMDTCS EHRLVFVFWA SSGCYVLKGG WIKEFVKRRG LVAGDEVGIY 240 WDPFASKFHF SVLRKAN* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.E02057.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010042934.1 | 1e-167 | PREDICTED: putative B3 domain-containing protein At1g78640 | ||||
TrEMBL | A0A059C500 | 0.0 | A0A059C500_EUCGR; Uncharacterized protein | ||||
STRING | XP_010058722.1 | 1e-169 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM456 | 9 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33720.1 | 8e-29 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.E02057.1.p |