PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.E02054.1.p | ||||||||
Common Name | EUGRSUZ_E02054 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 114aa MW: 12973.8 Da PI: 7.1836 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 34.7 | 3.1e-11 | 2 | 97 | 2 | 84 |
EEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTH.HHHHHHHT--TT-EEEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltled.esgrsWevkliyrkksgryvltkGW.keFvkangLkegDfvvFk 83 +k lt+sd + ++rl + + +++h + ++ ++ +++++d ++ + ++ + ++ +sg+yvl++GW keFvk gL +gD v ++ Eucgr.E02054.1.p 2 EKRLTHSDLGHLSRLLIGQDLVKSHflrwmseetvrQVESGQGADVIVRDmDTSSEHRLVFVFWASSGSYVLKGGWiKEFVKRRGLATGDEVGIY 96 6899************************99888887555568999999995556888888888*************999***********88777 PP E CS B3 84 l 84 Eucgr.E02054.1.p 97 W 97 4 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02362 | 2.6E-8 | 2 | 96 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 5.4E-14 | 2 | 107 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 1.16E-13 | 2 | 106 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 6.91E-14 | 3 | 109 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence Send to blast |
MEKRLTHSDL GHLSRLLIGQ DLVKSHFLRW MSEETVRQVE SGQGADVIVR DMDTSSEHRL 60 VFVFWASSGS YVLKGGWIKE FVKRRGLATG DEVGIYWEPI ASEFHFSLLH RAN* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.E02054.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010058722.2 | 5e-72 | PREDICTED: B3 domain-containing protein At2g33720 | ||||
TrEMBL | A0A059C5U3 | 3e-76 | A0A059C5U3_EUCGR; Uncharacterized protein | ||||
STRING | XP_010058722.1 | 8e-71 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM456 | 9 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33720.1 | 4e-23 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.E02054.1.p |