PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.E02051.1.p | ||||||||
Common Name | EUGRSUZ_E02051, LOC104446583 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 162aa MW: 18414.3 Da PI: 9.9865 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 38.4 | 2.2e-12 | 50 | 156 | 2 | 96 |
EEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTH.HHHHHHHT--TT-EEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesg.rsWevkliyrkksgryvltkGW.keFvkangLkegDfvv 81 +k lt+sd + ++rl + ++f+++h + ++ ++ +++++d + + ++ + ++ +sg++v+++GW keFvk gL +gD v Eucgr.E02051.1.p 50 KKRLTQSDLGHLSRLLIRRDFVKSHflrwmneetvrQVESSKGADVIVRDMDTcSEHRMVFVFWASSGSHVFKGGWiKEFVKRRGLAVGDEVG 142 5889************************98888877444457788999997767666677777*************999***********999 PP EEE-SS.SEE..EEEE CS B3 82 Fkldgr.sefelvvkv 96 ++ + s ++++++ Eucgr.E02051.1.p 143 IYW--EpSASKFHFSL 156 995..44555457666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 6.87E-16 | 48 | 157 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 5.66E-17 | 49 | 157 | No hit | No description |
SMART | SM01019 | 0.0032 | 49 | 160 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 7.4E-16 | 50 | 157 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 6.0E-9 | 51 | 155 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence Send to blast |
MASLTNAESF IVEKKAKCKR TQKGKKEASG CGAEEVCTEL TLLFDPYKIK KRLTQSDLGH 60 LSRLLIRRDF VKSHFLRWMN EETVRQVESS KGADVIVRDM DTCSEHRMVF VFWASSGSHV 120 FKGGWIKEFV KRRGLAVGDE VGIYWEPSAS KFHFSLLHKA N* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.E02051.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010058724.1 | 1e-116 | PREDICTED: putative B3 domain-containing protein At1g78640 | ||||
TrEMBL | A0A059C4Z6 | 1e-115 | A0A059C4Z6_EUCGR; Uncharacterized protein | ||||
STRING | XP_010058724.1 | 1e-116 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM456 | 9 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33720.1 | 6e-29 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.E02051.1.p |
Entrez Gene | 104446583 |