PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.E02013.1.p | ||||||||
Common Name | EUGRSUZ_E02013 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 173aa MW: 19984.9 Da PI: 9.2459 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 31.7 | 2.7e-10 | 59 | 163 | 2 | 94 |
EEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS.........-EEEEEE....EEETTEEEE-TTH.HHHHHHHT--TT-E CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesg.........rsWevkliy..rkksgryvltkGW.keFvkangLkegDf 79 +k+lt+sd + ++rl + + +++h g++ e+++ ++++ +g +We +l + + +sg+yvl+++W keFv+ gL ++D Eucgr.E02013.1.p 59 KKKLTKSDLGHQSRLLILRARMTTHvlpGMS--EEMETQVMSGEGanvvvwdadTRWEHQLVFsfWASSGAYVLKRCWiKEFVQRRGLAARDE 149 699**********************998666..56788899999999*99999999999996677*************899***********9 PP EEEEE-SS.SEE..EE CS B3 80 vvFkldgr.sefelvv 94 + ++ + ++ ++++ Eucgr.E02013.1.p 150 IGIYW--DpTTNRFHF 163 98884..434444455 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 1.33E-10 | 57 | 168 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 4.58E-11 | 58 | 167 | No hit | No description |
Gene3D | G3DSA:2.40.330.10 | 1.8E-12 | 59 | 170 | IPR015300 | DNA-binding pseudobarrel domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence Send to blast |
MVSWAPRNAV TLVKKSLLPN RSENSWPRSL TVREREEEEE RCNGISTELV LLFDPYKIKK 60 KLTKSDLGHQ SRLLILRARM TTHVLPGMSE EMETQVMSGE GANVVVWDAD TRWEHQLVFS 120 FWASSGAYVL KRCWIKEFVQ RRGLAARDEI GIYWDPTTNR FHFSLLCKAN QT* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.E02013.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010058709.2 | 5e-90 | PREDICTED: B3 domain-containing protein At2g33720 | ||||
TrEMBL | A0A059C5R9 | 1e-125 | A0A059C5R9_EUCGR; Uncharacterized protein | ||||
STRING | XP_010058709.1 | 1e-100 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM456 | 9 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33720.1 | 2e-22 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.E02013.1.p |