PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.E01943.1.p | ||||||||
Common Name | EUGRSUZ_E01943, LOC104446514 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 168aa MW: 18878.5 Da PI: 7.9069 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 31.6 | 2.9e-10 | 40 | 157 | 3 | 99 |
EE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS..........-EEEEEE..EEETTEEEE-TTHHH.HHHHHT CS B3 3 kvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesg..........rsWevkliyrkksgryvltkGWke.Fvkang 73 k+lt+sd ++rl lp ++++ h g ++e++++ + e+ ++ + ++y+ +sg yvl +GW+e Fv+ + Eucgr.E01943.1.p 40 KKLTKSDLDHLSRLLLPPDCVRIHvlrwmkkemvgGVHSKEGMEVNVIKERTegtegtegkdQEHRHVFRYWASSGCYVLNGGWSElFVNGGD 132 99*******************999****99999974445588899998887788999***88444444455*************9989***** PP --TT-EEEEEE-SSSEE..EEEEE-S CS B3 74 LkegDfvvFkldgrsefelvvkvfrk 99 L++gD + + + + + ++++kv+rk Eucgr.E01943.1.p 133 LNVGDEIGMYWNTN-SCKFHFKVLRK 157 **********6655.44469999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 2.75E-12 | 34 | 161 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 1.03E-12 | 36 | 156 | No hit | No description |
Gene3D | G3DSA:2.40.330.10 | 1.6E-14 | 38 | 164 | IPR015300 | DNA-binding pseudobarrel domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence Send to blast |
MKTPQWSASD VTRFVCAEGK ISSDVSTELA LYDDPWKIRK KLTKSDLDHL SRLLLPPDCV 60 RIHVLRWMKK EMVGGVHSKE GMEVNVIKER TEGTEGTEGK DQEHRHVFRY WASSGCYVLN 120 GGWSELFVNG GDLNVGDEIG MYWNTNSCKF HFKVLRKVAC GTSNPAA* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.E01943.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010058658.1 | 1e-123 | PREDICTED: B3 domain-containing protein At2g33720 | ||||
TrEMBL | A0A059C5G9 | 1e-122 | A0A059C5G9_EUCGR; Uncharacterized protein | ||||
STRING | XP_010058658.1 | 1e-123 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM456 | 9 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33720.1 | 6e-22 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.E01943.1.p |
Entrez Gene | 104446514 |