PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.E01933.1.p | ||||||||
Common Name | EUGRSUZ_E01933 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 160aa MW: 17687.5 Da PI: 10.4796 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 37.3 | 4.8e-12 | 41 | 149 | 2 | 99 |
EEE-..-HHHHT.T-EE--HHH.HTT...........---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHH.HHHHHT--TT-EE CS B3 2 fkvltpsdvlks.grlvlpkkfaeeh...........ggkkeesktltledesg.rsWevkliyrkksgryvltkGWke.FvkangLkegDfv 80 +k+lt+sd + + +rl+lp + +e+h + k+ ++++++++d + + ++ ++ + +s++yvl+ GW + Fvk gL++gD + Eucgr.E01933.1.p 41 KKKLTKSDLSDHlSRLILPGRLVEAHvlplmgeamagQVKSGGGMKVVMRDADTrDEHKLVFCRWLSSRSYVLKCGWTNlFVKRRGLEVGDEI 133 58999999988889*****************9999976666799*******7664789999999*************977************* PP EEEE-SS.SEE..EEEEE-S CS B3 81 vFkldgr.sefelvvkvfrk 99 ++ ++ s+f +++v+rk Eucgr.E01933.1.p 134 GIY--WDkSKF--HFTVHRK 149 ***..554888..7777665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 1.4E-16 | 34 | 152 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 2.35E-15 | 37 | 148 | IPR015300 | DNA-binding pseudobarrel domain |
SMART | SM01019 | 4.9E-5 | 40 | 150 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 1.9E-8 | 42 | 147 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 1.82E-13 | 47 | 147 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence Send to blast |
MEESSSAQSR LIHFIPFLLS SLGSSSSPPI QNASTDKCKI KKKLTKSDLS DHLSRLILPG 60 RLVEAHVLPL MGEAMAGQVK SGGGMKVVMR DADTRDEHKL VFCRWLSSRS YVLKCGWTNL 120 FVKRRGLEVG DEIGIYWDKS KFHFTVHRKV GRGTSNAVA* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.E01933.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018728845.1 | 1e-65 | PREDICTED: B3 domain-containing protein At2g33720-like | ||||
TrEMBL | A0A059C4T5 | 1e-113 | A0A059C4T5_EUCGR; Uncharacterized protein | ||||
STRING | XP_010058652.1 | 1e-87 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM456 | 9 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33720.1 | 7e-20 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.E01933.1.p |