PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.E01753.1.p | ||||||||
Common Name | EUGRSUZ_E01753 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 212aa MW: 23342.2 Da PI: 5.6473 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 43.4 | 6.1e-14 | 97 | 187 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS..SEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr..sefe 91 f+ +lt+s+v + +l +p + ++ + ++ t t+ + ++W+v l k +r + Wk+Fv++n+Lk+gD +vF+l++ ++ + Eucgr.E01753.1.p 97 FDVILTKSHVQPRYNLFIPSRMH---SLLPSQD-TQTVLAYKDKTWNVML--YTKTKR--FDYSWKQFVDDNHLKAGDACVFELMEClsTKVT 181 77899**************9975...3333333.66788899********..444445..5778*******************8853235555 PP .EEEEE CS B3 92 lvvkvf 97 ++v+++ Eucgr.E01753.1.p 182 FKVQIL 187 566665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 6.4E-18 | 93 | 189 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 4.12E-16 | 93 | 181 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 2.61E-18 | 95 | 188 | No hit | No description |
SMART | SM01019 | 0.0029 | 97 | 190 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 8.3E-12 | 97 | 187 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 12.111 | 97 | 190 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence Send to blast |
QHASSLHVPS STLRSPRSAR RCSSSSSDSD GDPPRIPETE AEDEAEDEAP LAPRSSSPST 60 ARTPVLDPAG VLSLPLRGNM SGGQEDDYWP LSGKPFFDVI LTKSHVQPRY NLFIPSRMHS 120 LLPSQDTQTV LAYKDKTWNV MLYTKTKRFD YSWKQFVDDN HLKAGDACVF ELMECLSTKV 180 TFKVQILRSD FPAELLGKIS GETAGAPIVI E* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.E01753.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010056520.1 | 2e-96 | PREDICTED: B3 domain-containing protein Os04g0386900 | ||||
TrEMBL | A0A059C4K6 | 1e-154 | A0A059C4K6_EUCGR; Uncharacterized protein (Fragment) | ||||
STRING | XP_010056520.1 | 9e-96 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM18654 | 5 | 6 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.E01753.1.p |