PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.E01095.2.p
Common NameEUGRSUZ_E01095
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 629aa    MW: 69263 Da    PI: 4.6858
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.E01095.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.31.2e-5291421128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                       lp GfrF+Ptdeel+++yL+ k++g++ e+ evi+e+d++k+ePwdLp  + +k+++ ew+fF++rd+ky++g+r+nrat++gyWkatgkd++
  Eucgr.E01095.2.p   9 LPLGFRFRPTDEELISHYLRLKINGRHSEV-EVIPEIDVCKWEPWDLPdlSVIKTDDPEWFFFCPRDRKYPNGHRSNRATDAGYWKATGKDRT 100
                       699************************999.99**************96447888899*********************************** PP

               NAM  92 vlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++s+        l+g+kktLvfy+grapkge+t+W+mheyr+
  Eucgr.E01095.2.p 101 IKSRksggaAAGLIGMKKTLVFYRGRAPKGERTHWIMHEYRA 142
                       ***8665444445***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-605165IPR003441NAC domain
PROSITE profilePS5100557.9289165IPR003441NAC domain
PfamPF023652.0E-2710141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 629 aa     Download sequence    Send to blast
MGVLEMEALP LGFRFRPTDE ELISHYLRLK INGRHSEVEV IPEIDVCKWE PWDLPDLSVI  60
KTDDPEWFFF CPRDRKYPNG HRSNRATDAG YWKATGKDRT IKSRKSGGAA AGLIGMKKTL  120
VFYRGRAPKG ERTHWIMHEY RATEQDLDGT GPGQAAYVLC RLFRKAEEKP EVVKYDEVEQ  180
TGLSPTAKSS PDEALSDVVP ETPVSNVQVK SQSDGIKRWL TDELDKMTPS TQMPVESCSN  240
SYIASDVEDG NTDGTPLETQ LKTGQAPYMD SPFACDFGND LEGLLFHDAG EHEITLSDLL  300
DEVFNNQDDS CEESTSQKNS VGSEIPFDPP FNLSQPVLGV KDNVWYDDLV DNNNWMDALP  360
LWGPSGAVAS NNMAESTGES FNSNGGTPIK IRTRDSQVLP HSSDYGAQGT APRRLRLAVD  420
RANQLPRSVK LEGADEGMRG TGSNAEEEVQ STAEESSVNH NDNTIVGTNI KIRTRQPRHQ  480
PGSENSIVQG IAPRRIRLQM NSQSGSTRDD EVKTSSFDEE VQSAPTKVKE ETDNISDHNE  540
PERDGQLPAH DKMTEIVEEP CTNLTLGSKP GGESRSHVMA PASLGIPSVR PASRSRLSLL  600
FAVGMSLVIV LAVVFSGGVQ RYIKLDIA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A9e-4411654165NO APICAL MERISTEM PROTEIN
1ut4_B9e-4411654165NO APICAL MERISTEM PROTEIN
1ut7_A9e-4411654165NO APICAL MERISTEM PROTEIN
1ut7_B9e-4411654165NO APICAL MERISTEM PROTEIN
3swm_A1e-4311657168NAC domain-containing protein 19
3swm_B1e-4311657168NAC domain-containing protein 19
3swm_C1e-4311657168NAC domain-containing protein 19
3swm_D1e-4311657168NAC domain-containing protein 19
3swp_A1e-4311657168NAC domain-containing protein 19
3swp_B1e-4311657168NAC domain-containing protein 19
3swp_C1e-4311657168NAC domain-containing protein 19
3swp_D1e-4311657168NAC domain-containing protein 19
4dul_A9e-4411654165NAC domain-containing protein 19
4dul_B9e-4411654165NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.E01095.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010056056.10.0PREDICTED: protein NTM1-like 9 isoform X2
TrEMBLA0A059C3W80.0A0A059C3W8_EUCGR; Uncharacterized protein
STRINGXP_010056056.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.11e-125NAC transcription factor-like 9