PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.E00361.1.p | ||||||||
Common Name | EUGRSUZ_E00361 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | CAMTA | ||||||||
Protein Properties | Length: 223aa MW: 25138.5 Da PI: 6.7748 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 28.6 | 2.4e-09 | 142 | 182 | 76 | 116 |
CG-1 76 ggvevlycyYahseenptfqrrcywlLeeelekivlvhyle 116 +v+v +cyY+ +++n++ q r++w+ + +le+i +vhy+e Eucgr.E00361.1.p 142 SSVDVWHCYYVYGQDNENSQCRSHWMFDGQLEHIGIVHYRE 182 689************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 13.219 | 77 | 189 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 1.1E-6 | 138 | 182 | IPR005559 | CG-1 DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence Send to blast |
MISWKHGISG RTPMRLSSPS IIGERRSLEP IAGRGPRRPC FCACCSVTKS VWSHYEATVR 60 NLRRLSNSRA YGFVLDLEQM LQELGHSRPH RTETCEILWK TRTFNDTRAT PFRPLGSVTS 120 DLILSLSFPA IYSETLIDLA DSSVDVWHCY YVYGQDNENS QCRSHWMFDG QLEHIGIVHY 180 RELNEVVEIE VSAETLTNTS MQCATPAHTP ANVTFSLLAA ID* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.E00361.1.p |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A059C123 | 1e-165 | A0A059C123_EUCGR; Uncharacterized protein | ||||
STRING | XP_010055420.1 | 4e-69 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64220.2 | 8e-14 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.E00361.1.p |