PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Eucgr.D02148.1.p

Common Name

EUGRSUZ_D02148, LOC104441980

Organism

Eucalyptus grandis

Taxonomic ID

71139

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

SRS

Protein Properties

Length: 369aa MW: 40377.9 Da PI: 9.513

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Eucgr.D02148.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	25.9	2.9e-08	36	71	5	40
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvk 40 + +C +CGn a+ C ++ C+ CC C+ hv Eucgr.D02148.1.p 36 KPKCIQCGNVARSRCPYQSCKSCCSKAQNPCHIHVL 71 568*******************************94 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05142	1.2E-5	38	74	IPR007818	Protein of unknown function DUF702

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence Send to blast
MAAQSAAAPP APPTAGAAVG HRTETPPPKT LRGLNKPKCI QCGNVARSRC PYQSCKSCCS 60 KAQNPCHIHV LKANATFPEK TPPSNSPIFS QQATEPSSSG SSLRVASLRQ LSNNFAQFNN 120 VQMPLRSKKP LTRKDAAAIN EWRFAKLKEF KDRHIEVENE SFDRYMQNVG LLEEVFALES 180 LAKGFGQDES STSISSPTCG EEKSIVFSEM KLKLKANPVR KENLRKRIHS VIDQGLRKLQ 240 KLELNSQAND SVAQGELNNR PKIKGFQVER ALIIRDLNEK LNKARNEEDL KSCLDMQAQL 300 ISQHVGLGET VAENTKPSLP AHSAGDDKKT GSGSAFSLPK SVCTAEIDQQ TLHIIGAHFS 360 SLEQIEKL*

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence Send to blast

MAAQSAAAPP APPTAGAAVG HRTETPPPKT LRGLNKPKCI QCGNVARSRC PYQSCKSCCS  60
KAQNPCHIHV LKANATFPEK TPPSNSPIFS QQATEPSSSG SSLRVASLRQ LSNNFAQFNN  120
VQMPLRSKKP LTRKDAAAIN EWRFAKLKEF KDRHIEVENE SFDRYMQNVG LLEEVFALES  180
LAKGFGQDES STSISSPTCG EEKSIVFSEM KLKLKANPVR KENLRKRIHS VIDQGLRKLQ  240
KLELNSQAND SVAQGELNNR PKIKGFQVER ALIIRDLNEK LNKARNEEDL KSCLDMQAQL  300
ISQHVGLGET VAENTKPSLP AHSAGDDKKT GSGSAFSLPK SVCTAEIDQQ TLHIIGAHFS  360
SLEQIEKL*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Eucgr.D02148.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010053563.1	0.0	PREDICTED: uncharacterized protein LOC104441980
TrEMBL	A0A059CI22	0.0	A0A059CI22_EUCGR; Uncharacterized protein
STRING	XP_010053563.1	0.0	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM7362	13	17

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32730.1	1e-98

Link Out ? help Back to Top
Phytozome	Eucgr.D02148.1.p
Entrez Gene	104441980