PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.D02099.1.p | ||||||||
Common Name | EUGRSUZ_D02099, LOC104441934 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | MYB | ||||||||
Protein Properties | Length: 192aa MW: 21966.7 Da PI: 8.4808 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.7 | 3.2e-19 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l + ++ +G ++WktIa++ g++R++k+c++rw++yl Eucgr.D02099.1.p 15 KGAWTAEEDSKLSQHIEIHGAKRWKTIAAKSGLNRCGKSCRLRWLNYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.3 | 1.4e-16 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eE++l+++++++lG++ W++Ia +++ gRt++++k++w+++l Eucgr.D02099.1.p 68 RGNISDEEEDLILRLHRLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 113 7899******************.*********.************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 17.9 | 10 | 62 | IPR017930 | Myb domain |
SMART | SM00717 | 1.6E-15 | 14 | 64 | IPR001005 | SANT/Myb domain |
SuperFamily | SSF46689 | 3.45E-29 | 14 | 109 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 1.3E-16 | 15 | 62 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.9E-24 | 16 | 69 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 2.56E-11 | 17 | 62 | No hit | No description |
PROSITE profile | PS51294 | 26.487 | 63 | 117 | IPR017930 | Myb domain |
SMART | SM00717 | 7.1E-16 | 67 | 115 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 4.6E-15 | 68 | 113 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 2.3E-25 | 70 | 118 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 1.21E-10 | 72 | 113 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009957 | Biological Process | epidermal cell fate specification | ||||
GO:0010090 | Biological Process | trichome morphogenesis | ||||
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0048481 | Biological Process | plant ovule development | ||||
GO:0048629 | Biological Process | trichome patterning | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence Send to blast |
MAPKNDESAK KVMSKGAWTA EEDSKLSQHI EIHGAKRWKT IAAKSGLNRC GKSCRLRWLN 60 YLRPNIKRGN ISDEEEDLIL RLHRLLGNRW SLIAGRLPGR TDNEIKNYWN SHLSKKINQR 120 QEVSTAQETT SQLRTRVAAP MEEEGANIVG SSEPTFDVNE FFDFSTEGSY GLEWVNKFLE 180 LDEDRCLTEK R* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1h8a_C | 6e-30 | 13 | 117 | 25 | 128 | MYB TRANSFORMING PROTEIN |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Controls the expression of genes involved in anthocyanin biosynthesis. Regulates the expression of at least 3 structural genes: chalcone synthase, dihydroflavonol reductase and flavonol O(3) glucosyltransferase. C1 acts as a trans-acting factor. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.D02099.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010053502.1 | 1e-140 | PREDICTED: transcription factor MYB114 | ||||
Swissprot | P10290 | 3e-51 | MYBC_MAIZE; Anthocyanin regulatory C1 protein | ||||
TrEMBL | A0A059CIQ3 | 1e-139 | A0A059CIQ3_EUCGR; Uncharacterized protein | ||||
STRING | XP_010053502.1 | 1e-140 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM4 | 28 | 2646 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14750.1 | 9e-53 | myb domain protein 66 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.D02099.1.p |
Entrez Gene | 104441934 |