PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.C02659.4.p
Common NameEUGRSUZ_C02659, LOC104439811
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 251aa    MW: 28429.5 Da    PI: 9.7789
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.C02659.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.85.9e-3087144258
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                       +Dgy+WrKYGqK+ k+++ pr+YYrC++a gCpvkkkv+rsaed ++++ tYeg Hnh
  Eucgr.C02659.4.p  87 RDGYQWRKYGQKVTKDNPSPRAYYRCSMApGCPVKKKVQRSAEDRTLLVATYEGLHNH 144
                       7***************************99**************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.6E-2976145IPR003657WRKY domain
PROSITE profilePS5081126.06281147IPR003657WRKY domain
SuperFamilySSF1182909.81E-2683145IPR003657WRKY domain
SMARTSM007741.2E-3386146IPR003657WRKY domain
PfamPF031061.5E-2488144IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MSSNTFGQEK ILRDELKRLR KENETLKVMV EVIGSKCSIL ETHLRESHCP PYHHDSNKRA  60
RLEEFPFTKS SKICVKVDEE DKSLVVRDGY QWRKYGQKVT KDNPSPRAYY RCSMAPGCPV  120
KKKVQRSAED RTLLVATYEG LHNHGTVDVP NRDRLPLRLD QSPRGQLVNR NLTLMPMMSP  180
SAIQPPIALD LGLSRSSFPQ DPKPSYLSKN LSFGNRSNDC AKIEEYAASL VRDPKFTEAL  240
ALTVARTLNN *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-22851441371WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.C02659.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010051128.10.0PREDICTED: WRKY transcription factor WRKY76
TrEMBLA0A059CSD50.0A0A059CSD5_EUCGR; Uncharacterized protein
STRINGXP_010051128.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.26e-39WRKY DNA-binding protein 18