PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.C01274.1.p | ||||||||
Common Name | EUGRSUZ_C01274, LOC104436749 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | bHLH | ||||||||
Protein Properties | Length: 367aa MW: 40264.6 Da PI: 7.2696 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.8 | 0.00023 | 244 | 282 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++++ L +l+ + +K + a++L +A+ YI+ Lq Eucgr.C01274.1.p 244 RKEKLGDRISALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 282 67788899999****9998.....8******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.947 | 232 | 281 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 3.14E-10 | 242 | 292 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.92E-6 | 242 | 286 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 8.0E-8 | 246 | 289 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 367 aa Download sequence Send to blast |
MKQGFYLQSS SPVQHMMSGN PNYWWNNINP PPPRSPFCHS SSSSPNLFLP YPPSSSLSSL 60 FHLNPSWVYN NNVNQEQLPE SLSQLLMGGL VGEEDKSSVM MNYLQEKRVE DWEEQQVLQQ 120 SPNDASVLDN QHHHLHVKQE DSASSYGVYG GAASDHHALQ GTTNKSAWSQ HHHHAMIPNS 180 PPKSCVTTSF SSSMLDFSNK KPVNKRQTPP DLSSECNSNA TGGVQKKAKV QPPSTSQSNT 240 FKVRKEKLGD RISALHQLVS PFGKTDTASV LLEAIGYIRF LQNQIEALSS PYIGSASGKT 300 RHHQSVRGER SPMFSEDSGQ ESINEEPKND LRSRGLCLVP VSCTLQVGSD NGADYWASAF 360 GGGGLR* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.C01274.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010047918.1 | 0.0 | PREDICTED: transcription factor bHLH68 | ||||
Swissprot | Q8S3D1 | 4e-70 | BH068_ARATH; Transcription factor bHLH68 | ||||
TrEMBL | A0A059CNM8 | 0.0 | A0A059CNM8_EUCGR; Uncharacterized protein | ||||
STRING | XP_010047918.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1872 | 28 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29100.1 | 1e-71 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.C01274.1.p |
Entrez Gene | 104436749 |
Publications ? help Back to Top | |||
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